19 homologs were found in PanDaTox collection
for query gene Ping_1312 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008709  Ping_1312  ABC transporter substrate-binding protein or LacI-type transcriptional regulator  100 
 
 		 357 aa  731    Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_2711  putative sugar ABC transporter, substrate-binding protein  49.39 
 
 		 369 aa  325  7e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.210601 
 
 
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NC_012791  Vapar_3345  putative sugar ABC transporter, substrate-binding protein  46.65 
 
 		 373 aa  311  7.999999999999999e-84  Variovorax paradoxus S110  Bacteria  normal  0.643163  n/a   
 
 
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NC_011988  Avi_5039  ABC-type sugar transport system, periplasmic component  46.99 
 
 		 364 aa  302  7.000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  0.797463  n/a   
 
 
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NC_011368  Rleg2_4516  putative sugar ABC transporter, substrate-binding protein  47.06 
 
 		 365 aa  301  8.000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.112183  normal  1 
 
 
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NC_003296  RS02363  signal peptide protein  46.58 
 
 		 366 aa  299  5e-80  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0272231 
 
 
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NC_012854  Rleg_6409  putative sugar ABC transporter, substrate-binding protein  45.48 
 
 		 365 aa  291  1e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000000237151  normal  0.403501 
 
 
-
 
NC_013421  Pecwa_3887  hypothetical protein  44.92 
 
 		 366 aa  287  2e-76  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3690  hypothetical protein  45.23 
 
 		 366 aa  287  2e-76  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3931  hypothetical protein  43.69 
 
 		 366 aa  282  7.000000000000001e-75  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_5185  putative signal peptide protein  46.73 
 
 		 377 aa  281  1e-74  Burkholderia phymatum STM815  Bacteria  normal  0.296404  normal  0.0737238 
 
 
-
 
NC_008309  HS_0765  ABC-type sugar-binding periplasmic protein  44.48 
 
 		 369 aa  279  6e-74  Haemophilus somnus 129PT  Bacteria  normal  0.234513  n/a   
 
 
-
 
NC_009484  Acry_1595  ABC-type sugar transport system periplasmic component-like protein  44.24 
 
 		 368 aa  271  1e-71  Acidiphilium cryptum JF-5  Bacteria  normal  0.32236  n/a   
 
 
-
 
NC_009439  Pmen_3830  hypothetical protein  37.9 
 
 		 344 aa  231  1e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.985949  normal  1 
 
 
-
 
NC_013739  Cwoe_2342  ABC-type sugar transport system periplasmic component-like protein  22.39 
 
 		 378 aa  55.8  0.000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.759463  normal  0.08592 
 
 
-
 
NC_008699  Noca_0806  ABC-type sugar transport system periplasmic component-like  21.74 
 
 		 398 aa  54.3  0.000003  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0679  ABC-type sugar transport system periplasmic component-like  25.85 
 
 		 387 aa  52.8  0.000009  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2362  ABC-type sugar transport system periplasmic component-like protein  23.03 
 
 		 380 aa  45.8  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0310858 
 
 
-
 
NC_010718  Nther_2685  Monosaccharide-transporting ATPase  22.89 
 
 		 306 aa  44.3  0.003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.450778  normal  1 
 
 
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