| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5039 |
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| Symbol | |
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| ID | 7381200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 31437 |
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| End bp | 32531 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648714 |
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| Product | ABC-type sugar transport system, periplasmic component |
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| Protein accession | YP_002546951 |
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| Protein GI | 222106160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.797463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA GACATATCCT GCAAGCAACC GGTGCCTTGA TACTGCTCAC GGCGGGCAAC
GCCTGGGCCG ATCCGATGGC AGAAGCCAAG GCGGTGGTCG ATAAATATGC CAGCAAGGTC
ACGACTTGGG ACGGACCGAA AAGCGCCCCA AAACCACAGC CGGGAAAAAC CATTGTTGTT
CTGGCTGGTG ACCTGAAAAA TGGTGGCATT CTGGGTGTCA GCAATGGCGT CGAGGAAGCC
GCCAAGGCCA TAGGCTGGCA GGTCAAGGTG CTGGATGGCG CAGGCTCGAT CGGTGGGCGT
ACCGCAGCTT TCGGTCAGGC CATGGCCTTG AAGCCTGATG CCATCATCAT CGACGGTTTC
GATGCAGTAG AACAGGCACC GGCGCTGGAA CAGGCGAAAG CCAATAAAAT CCCGCTGGTC
GCCTGGCATG CCGGTCCCAC CATCGGACCG GACGAAAAGA ACGGCCTGTT CGCCAATATC
AGCACTGACG CTATGGAAGT CTCCAAGGCC GCCGCCAACT GGGCCTATGT CGATGCCAAA
GGCAAGCCGG GCGTTATCAT CTTTACCGAC TCCACCTATG CCATCGCCAT CGCCAAGGCT
GACAAGATGA AGGCCGAAAT CGAGCGGCTG GGCGGCAAGG TTCTGGCCTA TGTCGATACG
CCGATTGCTG AAACCTCGCA GCGCATGCCA CAGCTGACCA CCTCGCTGTT GCAGAAATAC
GGCGACAGCT GGACCCATAC ATTGGCCATC AACGACCTCT ACTTCGATTT CATGGGACCA
TCGCTGGCCT CGGCAGGGAA GGGGGGAACC GATGCACCGA TCAATGTCGC TGCAGGGGAT
GGTTCCGAAT CCGCCTATCA GCGCATCCGC GCTGGCCAGT ACCAGAAGGT GACGGTGGCC
GAACCCTTGA ACCTGCAAGG CTGGCAATTG GTGGATGAGT TGAACCGCGC CCTCAATGGC
GAAAAATGGT CCGGCTATAT GTCGCCGCTG CATGTGGTGA CAGCCGACAA TGTCGAATTC
GATGGCGGAC CGAAAAACAG CTTCGATCCC GACAATGGCT ATCGGGATGC CTATAAGAAA
ATCTGGGGCA AATGA
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| Protein sequence | MKRRHILQAT GALILLTAGN AWADPMAEAK AVVDKYASKV TTWDGPKSAP KPQPGKTIVV
LAGDLKNGGI LGVSNGVEEA AKAIGWQVKV LDGAGSIGGR TAAFGQAMAL KPDAIIIDGF
DAVEQAPALE QAKANKIPLV AWHAGPTIGP DEKNGLFANI STDAMEVSKA AANWAYVDAK
GKPGVIIFTD STYAIAIAKA DKMKAEIERL GGKVLAYVDT PIAETSQRMP QLTTSLLQKY
GDSWTHTLAI NDLYFDFMGP SLASAGKGGT DAPINVAAGD GSESAYQRIR AGQYQKVTVA
EPLNLQGWQL VDELNRALNG EKWSGYMSPL HVVTADNVEF DGGPKNSFDP DNGYRDAYKK
IWGK
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