28 homologs were found in PanDaTox collection
for query gene Noca_0679 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008699  Noca_0679  ABC-type sugar transport system periplasmic component-like  100 
 
 		 387 aa  769    Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0099  ABC-type sugar transport system periplasmic component-like  27.89 
 
 		 400 aa  141  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_0765  ABC-type sugar-binding periplasmic protein  26.84 
 
 		 369 aa  107  3e-22  Haemophilus somnus 129PT  Bacteria  normal  0.234513  n/a   
 
 
-
 
NC_003296  RS02363  signal peptide protein  24.55 
 
 		 366 aa  87  5e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0272231 
 
 
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NC_013421  Pecwa_3887  hypothetical protein  24.17 
 
 		 366 aa  82.8  0.000000000000009  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3690  hypothetical protein  23.87 
 
 		 366 aa  82.8  0.00000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3931  hypothetical protein  24.17 
 
 		 366 aa  81.6  0.00000000000002  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_2711  putative sugar ABC transporter, substrate-binding protein  24.85 
 
 		 369 aa  79  0.0000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.210601 
 
 
-
 
NC_008699  Noca_0588  ABC-type sugar transport system periplasmic component-like  25.94 
 
 		 390 aa  78.2  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_5185  putative signal peptide protein  24.47 
 
 		 377 aa  76.3  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.296404  normal  0.0737238 
 
 
-
 
NC_013739  Cwoe_2342  ABC-type sugar transport system periplasmic component-like protein  22.22 
 
 		 378 aa  74.3  0.000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.759463  normal  0.08592 
 
 
-
 
NC_008699  Noca_0806  ABC-type sugar transport system periplasmic component-like  26.19 
 
 		 398 aa  73.2  0.000000000007  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3345  putative sugar ABC transporter, substrate-binding protein  25.45 
 
 		 373 aa  73.2  0.000000000007  Variovorax paradoxus S110  Bacteria  normal  0.643163  n/a   
 
 
-
 
NC_011368  Rleg2_4516  putative sugar ABC transporter, substrate-binding protein  27.79 
 
 		 365 aa  71.6  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.112183  normal  1 
 
 
-
 
NC_009484  Acry_1595  ABC-type sugar transport system periplasmic component-like protein  25.68 
 
 		 368 aa  71.6  0.00000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.32236  n/a   
 
 
-
 
NC_008541  Arth_1810  ABC-type sugar transport system periplasmic component-like protein  25.21 
 
 		 388 aa  70.9  0.00000000003  Arthrobacter sp. FB24  Bacteria  normal  0.0233725  n/a   
 
 
-
 
NC_012854  Rleg_6409  putative sugar ABC transporter, substrate-binding protein  28.1 
 
 		 365 aa  70.1  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000000237151  normal  0.403501 
 
 
-
 
NC_008699  Noca_0604  ABC-type sugar transport system periplasmic component-like  25.06 
 
 		 391 aa  70.1  0.00000000007  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011988  Avi_5039  ABC-type sugar transport system, periplasmic component  27.19 
 
 		 364 aa  67.4  0.0000000004  Agrobacterium vitis S4  Bacteria  normal  0.797463  n/a   
 
 
-
 
NC_013739  Cwoe_2362  ABC-type sugar transport system periplasmic component-like protein  23.05 
 
 		 380 aa  65.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0310858 
 
 
-
 
NC_009439  Pmen_3830  hypothetical protein  22.46 
 
 		 344 aa  55.5  0.000002  Pseudomonas mendocina ymp  Bacteria  normal  0.985949  normal  1 
 
 
-
 
NC_008709  Ping_1312  ABC transporter substrate-binding protein or LacI-type transcriptional regulator  21.43 
 
 		 357 aa  54.3  0.000003  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_4004  ABC-type sugar transport system periplasmic component-like protein  25.37 
 
 		 399 aa  49.3  0.0001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_4829  putative ABC transporter (ribose binding protein)  23.44 
 
 		 339 aa  45.8  0.001  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3490  sugar ABC transporter, periplasmic sugar-binding protein  26.32 
 
 		 309 aa  45.1  0.002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.70516  n/a   
 
 
-
 
NC_008309  HS_0767  sugar ABC transporter, periplasmic sugar-binding protein  36.76 
 
 		 312 aa  43.9  0.005  Haemophilus somnus 129PT  Bacteria  unclonable  0.0000000173406  n/a   
 
 
-
 
NC_010003  Pmob_0923  monosaccharide-transporting ATPase  22.61 
 
 		 289 aa  43.1  0.008  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_2340  ABC transporter binding protein  25.25 
 
 		 351 aa  43.1  0.009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0518238  normal  0.638371 
 
 
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