10 homologs were found in PanDaTox collection
for query gene Ppro_2920 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_2920  peptidoglycan-binding LysM  100 
 
 
253 aa  493  1e-139  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0178  hypothetical protein  37.4 
 
 
415 aa  77.8  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000278658 
 
 
-
 
NC_011146  Gbem_0196  hypothetical protein  38.02 
 
 
429 aa  75.1  0.0000000000009  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3276  LysM domain-containing protein  34.27 
 
 
561 aa  75.1  0.000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.548139  n/a   
 
 
-
 
NC_009483  Gura_0368  hypothetical protein  32.67 
 
 
352 aa  75.1  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.124344  n/a   
 
 
-
 
NC_007517  Gmet_0860  peptidoglycan-binding LysM  44.44 
 
 
529 aa  72.8  0.000000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3225  peptidoglycan-binding LysM  33.08 
 
 
566 aa  68.2  0.0000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.133183 
 
 
-
 
NC_002939  GSU2610  LysM domain-containing protein  40.45 
 
 
512 aa  65.1  0.000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.417796  n/a   
 
 
-
 
NC_011899  Hore_21400  Peptidoglycan-binding LysM  43.86 
 
 
500 aa  48.9  0.00008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0610  pullulanase, type I  25.81 
 
 
1888 aa  45.1  0.001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
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