Gene Gbem_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0196 
Symbol 
ID6783018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp231390 
End bp232679 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content65% 
IMG OID642766162 
Producthypothetical protein 
Protein accessionYP_002137023 
Protein GI197116596 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATC CGACCAAGGC CAAGGGAATG CTCCTCTTGG CGCTCCTTTC GCTGCCGTGC 
CAGTTGCACG CAGCGCCCCC CCAGTATGAA ATCGACCTGA AGGAGTTGGA CCGGCAAAAG
CCGGCCCCAG CCCCGAAACC GGCAAAGAAA GAGGCTCCGG CCCAAAAGCA CGCCCCGACA
AAAAGGGAAG CACCCGGGGA GACTCCTCGT CCCGCCAAGG GAGCAGCACC TTCCAGCGCT
TCCGGGGAGT ACGTCCGCTA TACGGTGAAG CCGGGGGACC ACATCTTCAA GATCCTCATG
GTGAACTTCG GGATGTCCAA CGAGGCCGCG GAACGGCTGA TCCCTGAGAT CGTGCGGATC
AACAACATCA GCAACATCAA AGCGCTGACA GTGGGACGCA CCTTGCTGAT ACCCGCACAG
GGAAAGCAGA CAACAAGCGG ACACCATCCC CGGAAAGAGA AACACAAGGA AAAGCCGCGG
GCAGCCGCCC CCGAGGCTAA GACATCCCAC GAGAAAGCGC CTGCCGCGCC GTCCGCCCCT
GCCCCGCAGG CACCTGAGGC GGCACCGAGG GCTCCGGAGC CTGCCCCGAG GGCACCTGAA
CCGGTACCGG CACCTGCGCC TCGCCCTGCT GAACCTGCAC CTGCCGCACC CGCGGCGAAA
CCTGCTCCGG CTCTTGTTCC CGTTCCGGCT CCGGCTCCTG CTGTAAAGGC TCCTGCTCCG
GCTCCGGCTG TAAAGGCTCC CGCTCCCGCT CCCGCTCCTG TTCCCGCGCC GGCAGCGCCG
GCCGCCGTGC CGGCTCCTCT TGCTGTGCCG CAGGCTGCCA CCTGGGTCTG CCCCGCGGCT
AAGAAAAACA CGGCAGCCAT CGTCGACTCG CTGCTCAACG CCCTCTCCGC CTCCTGGAGC
AAGAGCAAAA TCATCCACTC CGGCAGCGGC GCCCCCACTA CCTTCAGCAT CAGGGTGGAC
CGCTACTTCG AGTACAAGGG CGCACGCTAC GTCATCAGCC TCGGTGAAAG CGACCCCTAC
AACTACACCC TGATCAGGCT GCTTGAGGCG GCAGGGTACC GCGTACTCAT GCTGAGCGGG
GGCGAGGACT TCAAGACCAC CTCTGAGAAG CTATTCAAGC TCGTGGGCAT CGAACCGGCG
TTCGGAAACT ATCCACTGTC AGGGGGGAAT CAGGCGGCGG GTTACCTGCT CCAGCAGGAA
GACGCAGGGG GGAGACGGGT GTTGCTTACG GAAGGCGCGC CGCCCCCGGG GCACAAGTGG
GTGCTGCCCC TGGGATGCGG CCCGAAATAG
 
Protein sequence
MTNPTKAKGM LLLALLSLPC QLHAAPPQYE IDLKELDRQK PAPAPKPAKK EAPAQKHAPT 
KREAPGETPR PAKGAAPSSA SGEYVRYTVK PGDHIFKILM VNFGMSNEAA ERLIPEIVRI
NNISNIKALT VGRTLLIPAQ GKQTTSGHHP RKEKHKEKPR AAAPEAKTSH EKAPAAPSAP
APQAPEAAPR APEPAPRAPE PVPAPAPRPA EPAPAAPAAK PAPALVPVPA PAPAVKAPAP
APAVKAPAPA PAPVPAPAAP AAVPAPLAVP QAATWVCPAA KKNTAAIVDS LLNALSASWS
KSKIIHSGSG APTTFSIRVD RYFEYKGARY VISLGESDPY NYTLIRLLEA AGYRVLMLSG
GEDFKTTSEK LFKLVGIEPA FGNYPLSGGN QAAGYLLQQE DAGGRRVLLT EGAPPPGHKW
VLPLGCGPK