11 homologs were found in PanDaTox collection
for query gene Gbem_0196 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_0196  hypothetical protein  100 
 
 		 429 aa  837    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0178  hypothetical protein  86.63 
 
 		 415 aa  283  4.0000000000000003e-75  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000278658 
 
 
-
 
NC_009483  Gura_0368  hypothetical protein  48.89 
 
 		 352 aa  114  3e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.124344  n/a   
 
 
-
 
NC_002939  GSU3276  LysM domain-containing protein  39.21 
 
 		 561 aa  107  5e-22  Geobacter sulfurreducens PCA  Bacteria  normal  0.548139  n/a   
 
 
-
 
NC_007517  Gmet_0860  peptidoglycan-binding LysM  38.03 
 
 		 529 aa  94.4  3e-18  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_3225  peptidoglycan-binding LysM  44.92 
 
 		 566 aa  93.6  7e-18  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.133183 
 
 
-
 
NC_002939  GSU2610  LysM domain-containing protein  43.69 
 
 		 512 aa  90.9  4e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.417796  n/a   
 
 
-
 
NC_009483  Gura_1461  hypothetical protein  35.61 
 
 		 393 aa  77  0.0000000000007  Geobacter uraniireducens Rf4  Bacteria  normal  0.0148599  n/a   
 
 
-
 
NC_010814  Glov_1637  peptidoglycan-binding LysM  31.25 
 
 		 435 aa  76.3  0.0000000000009  Geobacter lovleyi SZ  Bacteria  normal  0.0111734  n/a   
 
 
-
 
NC_008609  Ppro_2920  peptidoglycan-binding LysM  37.5 
 
 		 253 aa  72.8  0.00000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B0875  hypothetical protein  54.43 
 
 		 554 aa  46.2  0.001  Burkholderia sp. 383  Bacteria  normal  1  normal  0.276101 
 
 
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