10 homologs were found in PanDaTox collection
for query gene Gmet_3225 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007517  Gmet_3225  peptidoglycan-binding LysM  100 
 
 		 566 aa  1144    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.133183 
 
 
-
 
NC_002939  GSU3276  LysM domain-containing protein  48.51 
 
 		 561 aa  478  1e-133  Geobacter sulfurreducens PCA  Bacteria  normal  0.548139  n/a   
 
 
-
 
NC_002939  GSU2610  LysM domain-containing protein  33.81 
 
 		 512 aa  252  1e-65  Geobacter sulfurreducens PCA  Bacteria  normal  0.417796  n/a   
 
 
-
 
NC_007517  Gmet_0860  peptidoglycan-binding LysM  31.17 
 
 		 529 aa  233  1e-59  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_1461  hypothetical protein  31.81 
 
 		 393 aa  156  8e-37  Geobacter uraniireducens Rf4  Bacteria  normal  0.0148599  n/a   
 
 
-
 
NC_010814  Glov_1637  peptidoglycan-binding LysM  31.29 
 
 		 435 aa  152  2e-35  Geobacter lovleyi SZ  Bacteria  normal  0.0111734  n/a   
 
 
-
 
NC_009483  Gura_0368  hypothetical protein  38.96 
 
 		 352 aa  119  1.9999999999999998e-25  Geobacter uraniireducens Rf4  Bacteria  normal  0.124344  n/a   
 
 
-
 
NC_012918  GM21_0178  hypothetical protein  41.22 
 
 		 415 aa  96.3  1e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000278658 
 
 
-
 
NC_011146  Gbem_0196  hypothetical protein  41.13 
 
 		 429 aa  88.2  4e-16  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2920  peptidoglycan-binding LysM  29.46 
 
 		 253 aa  59.3  0.0000002  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
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