| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3276 |
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| Symbol | |
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| ID | 2687661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3592634 |
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| End bp | 3594319 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637127968 |
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| Product | LysM domain-containing protein |
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| Protein accession | NP_954316 |
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| Protein GI | 39998365 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.548139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTGC CATCCCGCTC TCCGAGGAAC CACATGAACA CATGCCATTT CTACCGGGTC
CAGTTGCTTC GTGCCTCTCT TCTGCTCATG GCCATTAGCG CCACGGCGTC AGCCTCCGCC
ACCTCTTTCG AACTCGACGT GAAGGACCTG CAGACCGTTG CCCCGGCCAA GCGCGCTCCC
AAGCGCAAAG CCCCCGCTCC GGCCGCTTCT GCCGAAACCA AGCGCGATAC CGTCCCTGCC
GAAACGAAGA GGGGTGTTTC CCGTTATACC GTTAAGCCGG GTGACTTCAT CTTCAAGATA
CTGATGCGGG AATACGGCCT TTCAAATGCG GCGGCTGAAG CGCTCATCCC TGAAATCCAG
AGGATCAACA ACCTGCGGAG CATCACTCGT CTTTCGGTTG GACAGACCAT CCTCATTCCC
CTTGAGGGGC CACGGGCTGC TGTACGCGTT CAGGAGTTCG GTGAACGCCG GGAGACGGCC
GAACCCGCCG CAACCGTAGC AGTTGCCCCC CCTACGGAGC CATCGCCCCA GGTTGTTGAA
TCAGGCCCGG CTCCACCGTC TGAGCAGACA GCCCCCCCTG TTACTGAAGC CGCCGCTCCC
GTGCCCCCCC GGCCCGAGCC GGCACCGGCA ACGCGCCCCG CTGAAGCAGC ACCACCGATC
TCCCCGGCAC CGGTCGTCGT TTCGGCGCCC TCCTCTTTCA GCCGGCGGCT CATCACCCTG
TGGCAGAGCC TCGTCCCCGG CCAGGAAAGG GTGGAACCCA TCACACTCAA CGGCAGGGTG
CTCCCGCCCG AGGAATTCCC CCTTCTTCTC GCCGCTGACG GTGGGAAGAT ACTGGTCGAC
ATGAAAGGGA CTCTGCTTCC CCGCGACAAA AGCACCTTGG CTGAAAGACA TCCCGATATC
CGGCTGGTCT CGCGCGGAGC CAGCAGTGAA CGGGATTTTT TCACCGTCCT GCTGCGCACC
GCGGAATTTG CCCACGTGGA AGAAGACGCC GTCGCCACAA TAGGCTCCGA TCCCCAGCTC
ACGGTCAAGG CCGACTACCG AATTACCAGG CTGCCGGCAG TTGCCACGCG TGGACCGGAA
AATGTATTTC TCTTTCTTGA GCGTAACGGG TCCTGCCTCC CAGCAGCACT CATCTCGGCC
CTTGCCGATA ACGGGATCAA CAGTGTGGAA TTCTGCGATG TCGCTCCGCA GCCGCCGTCG
GTACCGGGCT ACGAGTTGAG GAGCGTAACC GGCACGACCC CGTGCGAATT GGCTGTCCAA
TTGCTTGGTG TCCTGGCCGT GAAGCTTGAC CGCAACCGGA TTGTATCGGG CTCCATGGGG
GAGAATGCGG AGAGCCGGTT CAGCATCCGC GTGGATGGAT ATTTTGAAAA CGACGGGAAG
AAGTTCATCC TGAGCTGTAA CGACAATGAC TCCTACAACT ACACGCTCTT TCGCCTGCTG
CAGCTGGAAG GATACGGCAT CATCCAACTG GGAGACAAAG ACGACTTCGC CACCGTCGCG
GACAAGATCC TCACGGTTCT GCGCTATCCC CACTCCTTCG GCCGCCATGA TTTCACCCAT
GACCGTTATA CCGTATCGGC GCTGGGGTTC AGGGTGACGC GGCTGGGGCC GGTTAGCGGC
CGCATGCTGA TCATCGATCG CCCCGTGGAC CCGGCATTCG CAGAATTATT ACAATGGGAA
CGCTAG
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| Protein sequence | MALPSRSPRN HMNTCHFYRV QLLRASLLLM AISATASASA TSFELDVKDL QTVAPAKRAP
KRKAPAPAAS AETKRDTVPA ETKRGVSRYT VKPGDFIFKI LMREYGLSNA AAEALIPEIQ
RINNLRSITR LSVGQTILIP LEGPRAAVRV QEFGERRETA EPAATVAVAP PTEPSPQVVE
SGPAPPSEQT APPVTEAAAP VPPRPEPAPA TRPAEAAPPI SPAPVVVSAP SSFSRRLITL
WQSLVPGQER VEPITLNGRV LPPEEFPLLL AADGGKILVD MKGTLLPRDK STLAERHPDI
RLVSRGASSE RDFFTVLLRT AEFAHVEEDA VATIGSDPQL TVKADYRITR LPAVATRGPE
NVFLFLERNG SCLPAALISA LADNGINSVE FCDVAPQPPS VPGYELRSVT GTTPCELAVQ
LLGVLAVKLD RNRIVSGSMG ENAESRFSIR VDGYFENDGK KFILSCNDND SYNYTLFRLL
QLEGYGIIQL GDKDDFATVA DKILTVLRYP HSFGRHDFTH DRYTVSALGF RVTRLGPVSG
RMLIIDRPVD PAFAELLQWE R
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