Gene Ppro_2920 details

Gene Information

• Locus tag: Ppro_2920
• ID: 4574747
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 3194430
• End bp: 3195191
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639756972
• Product: peptidoglycan-binding LysM
• Protein accession: YP_902575
• Protein GI: 118581325

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGAACG GAACTGAGAC ACACAAAAGG GTAACGGCAC TGTTATTGAT GCTGGGCGGT 
GTGTTCTGCG CCACTTTCTG GGCACACGCC GGCCAGGAGT CCTACGACAT CAACCTGGGA 
GAGCTGCGCA AGCCCTCATA CGACATTGAC CTGAGGGAGT TGCGCCGAAC GCCGCCGCGG 
CGCGCCAAGG CAAAGCGTAA AACCCGGCCG CCACGGAGAG CCCACGCCGC CGCACCCGCA 
CCGACTTCCA CCGGAGACGG AAGCAGCATC TACACCGTTC GCCCCGGCGA CCACATCTTC 
CTGATTCTCA GCAGTCGCTA CGGCCTCTCC GACACTGCAA CGGAACGGAT GACCCCCCGG 
GTGATGCAGA TGAACGGCAT CCGCAATCCC CATCGCCTGA CCATTGGGCA GCGCCTGATC 
ATCCCGCTCA ACCCGCCAGA AACAGCACCA TCGCCTGACA GCGGGCGGAA CACGACTCCA 
GCCTCGCCGG TGCCGACGCC GCTCCCCCTG CCCCCGGTCG CCCCCGCGAC GCCATCTGCC 
GCCTCGCCTG CCCCAGCTGC CGCACCAGAG GCTCCCTCCG ACAAGCCCCA AACTCACCCC 
GTCGCACCCT GGCCAGTTCC CGCGGAACCG CAGTTCGCCC CCCCAACAGT TCAGACGCCT 
TCTGTCGTTT CACCCCAGGC TTCCCCGGTT GCACCGCCGG TTTCTCCCGC TGAGCCCCGG 
CCGCCCGCCA CCGTGCCTCC GGCCGCTCCG AAGGCCCCCT AG 

 

Protein sequence

MKNGTETHKR VTALLLMLGG VFCATFWAHA GQESYDINLG ELRKPSYDID LRELRRTPPR 
RAKAKRKTRP PRRAHAAAPA PTSTGDGSSI YTVRPGDHIF LILSSRYGLS DTATERMTPR 
VMQMNGIRNP HRLTIGQRLI IPLNPPETAP SPDSGRNTTP ASPVPTPLPL PPVAPATPSA 
ASPAPAAAPE APSDKPQTHP VAPWPVPAEP QFAPPTVQTP SVVSPQASPV APPVSPAEPR 
PPATVPPAAP KAP