Gene GM21_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0178 
Symbol 
ID8135481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp214096 
End bp215343 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content64% 
IMG OID644867797 
Producthypothetical protein 
Protein accessionYP_003020021 
Protein GI253698832 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0000000000278658 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAATT CCACCAAGGC CAGGAGAGTG CTCCTCTTGG CGCTCCTTTC GCTGCCGTAC 
CAGTTGCACG CAGCGCCCCC CCAATACGAA ATCGACCTGA AGGAGTTGGA CCGGCAAAAG
CCGGTCAAAG CCCCGAAACC GGCAAAGAAA GAGGCTCCGG TCCAAAAGCG CGCCCCGGCT
AAAAAGGAGG CACCCGGGGA GACTCCTCGT CCAGCCAAGG GAGCAGCCCC TTCCAGCGCT
TCCGGGGAAT ACGTCCGCTA TACGGTGAAG CCGGGGGACC ACATCTTCAA GGTCCTCATG
GTGAACTTCG GGATGTCCAA CGCCGCCGCG GAACGGCTGA TCCCTGAGAT CGTGCGGATC
AACAACATCA GCAACATCAG GGCGCTGGCG GTGGGACGCA CCCTGCTGAT ACCCGCACAG
GGAAAACAGA CAACAAGCGG ACGCCAATCC AGAAAAGAGA GACACAAGGA AAAGTCGCGG
ACAGCCGCCC CCGAGGCTAG AAGATCCCAC GAGAAAGCGC CTGCCGTGCC GTCCGCCCCT
GCCCCGCAGG CACCCGAAAC GGCCCCGAGG GCACCTGAGC CGGCACCTGC GCCTCGCCCT
GCTGAATCTG CACCTGCCGC AGCCGAGGCG AAACCGGCCC CGGCTCCTGC CGTAAAGGCT
CCTGCCGGCG TTCCCGCTCC GGTTCCCGCT CCGGTTCCCG CTCCGGTTCC CGCTCCGGTT
CCCGCTCCGG CAGCACCGGC CGCAGTGCCG GCTCCTCCGG CTTTGCCGCA GGCTACCACC
TGGGTCTGCC CCGCTGCCAA GCAGAACACG GCAGCCATCG TAGACTCGCT GCTCAACGCC
ATCTCCGCCT CCTGGAGCAA GAGCAAGATC ATCCACTCAG GCAGCGGCGC CCCCACTACC
TTCAGCATCA GGGTGGACCG CTACTTCGAG TACAAAGGCG CACGCTACGT CATCAGCATC
GGCGAAAACG ACCCCTACAA CTACACCCTG ATCAGGCTGC TGGAGGCTGC AGGGTACCGC
GTACTCATGC TGAGCGGGTA CGAGGAGTTC AAGACCACCT CTGACAAGCT GTTCAAGCTC
GCGGGGGTCG AACCGGCGTT CGGAAACTAT CCACTGCCGG GGGGGAATCA GGCGACGGGT
TACTTGCTCC AGCAGGAAGA CGCAGGGGGG AGACGGGTGT TGCTGACGGA AGGCGCGCCG
CCCCCGGGAC ACAAGTGGGT GCTGCCCCAG GGGTGCGGTC CGAAATAG
 
Protein sequence
MTNSTKARRV LLLALLSLPY QLHAAPPQYE IDLKELDRQK PVKAPKPAKK EAPVQKRAPA 
KKEAPGETPR PAKGAAPSSA SGEYVRYTVK PGDHIFKVLM VNFGMSNAAA ERLIPEIVRI
NNISNIRALA VGRTLLIPAQ GKQTTSGRQS RKERHKEKSR TAAPEARRSH EKAPAVPSAP
APQAPETAPR APEPAPAPRP AESAPAAAEA KPAPAPAVKA PAGVPAPVPA PVPAPVPAPV
PAPAAPAAVP APPALPQATT WVCPAAKQNT AAIVDSLLNA ISASWSKSKI IHSGSGAPTT
FSIRVDRYFE YKGARYVISI GENDPYNYTL IRLLEAAGYR VLMLSGYEEF KTTSDKLFKL
AGVEPAFGNY PLPGGNQATG YLLQQEDAGG RRVLLTEGAP PPGHKWVLPQ GCGPK