Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0178 |
Symbol | |
ID | 8135481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 214096 |
End bp | 215343 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644867797 |
Product | hypothetical protein |
Protein accession | YP_003020021 |
Protein GI | 253698832 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0000000000278658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAATT CCACCAAGGC CAGGAGAGTG CTCCTCTTGG CGCTCCTTTC GCTGCCGTAC CAGTTGCACG CAGCGCCCCC CCAATACGAA ATCGACCTGA AGGAGTTGGA CCGGCAAAAG CCGGTCAAAG CCCCGAAACC GGCAAAGAAA GAGGCTCCGG TCCAAAAGCG CGCCCCGGCT AAAAAGGAGG CACCCGGGGA GACTCCTCGT CCAGCCAAGG GAGCAGCCCC TTCCAGCGCT TCCGGGGAAT ACGTCCGCTA TACGGTGAAG CCGGGGGACC ACATCTTCAA GGTCCTCATG GTGAACTTCG GGATGTCCAA CGCCGCCGCG GAACGGCTGA TCCCTGAGAT CGTGCGGATC AACAACATCA GCAACATCAG GGCGCTGGCG GTGGGACGCA CCCTGCTGAT ACCCGCACAG GGAAAACAGA CAACAAGCGG ACGCCAATCC AGAAAAGAGA GACACAAGGA AAAGTCGCGG ACAGCCGCCC CCGAGGCTAG AAGATCCCAC GAGAAAGCGC CTGCCGTGCC GTCCGCCCCT GCCCCGCAGG CACCCGAAAC GGCCCCGAGG GCACCTGAGC CGGCACCTGC GCCTCGCCCT GCTGAATCTG CACCTGCCGC AGCCGAGGCG AAACCGGCCC CGGCTCCTGC CGTAAAGGCT CCTGCCGGCG TTCCCGCTCC GGTTCCCGCT CCGGTTCCCG CTCCGGTTCC CGCTCCGGTT CCCGCTCCGG CAGCACCGGC CGCAGTGCCG GCTCCTCCGG CTTTGCCGCA GGCTACCACC TGGGTCTGCC CCGCTGCCAA GCAGAACACG GCAGCCATCG TAGACTCGCT GCTCAACGCC ATCTCCGCCT CCTGGAGCAA GAGCAAGATC ATCCACTCAG GCAGCGGCGC CCCCACTACC TTCAGCATCA GGGTGGACCG CTACTTCGAG TACAAAGGCG CACGCTACGT CATCAGCATC GGCGAAAACG ACCCCTACAA CTACACCCTG ATCAGGCTGC TGGAGGCTGC AGGGTACCGC GTACTCATGC TGAGCGGGTA CGAGGAGTTC AAGACCACCT CTGACAAGCT GTTCAAGCTC GCGGGGGTCG AACCGGCGTT CGGAAACTAT CCACTGCCGG GGGGGAATCA GGCGACGGGT TACTTGCTCC AGCAGGAAGA CGCAGGGGGG AGACGGGTGT TGCTGACGGA AGGCGCGCCG CCCCCGGGAC ACAAGTGGGT GCTGCCCCAG GGGTGCGGTC CGAAATAG
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Protein sequence | MTNSTKARRV LLLALLSLPY QLHAAPPQYE IDLKELDRQK PVKAPKPAKK EAPVQKRAPA KKEAPGETPR PAKGAAPSSA SGEYVRYTVK PGDHIFKVLM VNFGMSNAAA ERLIPEIVRI NNISNIRALA VGRTLLIPAQ GKQTTSGRQS RKERHKEKSR TAAPEARRSH EKAPAVPSAP APQAPETAPR APEPAPAPRP AESAPAAAEA KPAPAPAVKA PAGVPAPVPA PVPAPVPAPV PAPAAPAAVP APPALPQATT WVCPAAKQNT AAIVDSLLNA ISASWSKSKI IHSGSGAPTT FSIRVDRYFE YKGARYVISI GENDPYNYTL IRLLEAAGYR VLMLSGYEEF KTTSDKLFKL AGVEPAFGNY PLPGGNQATG YLLQQEDAGG RRVLLTEGAP PPGHKWVLPQ GCGPK
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