| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21400 |
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| Symbol | |
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| ID | 7313378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2328731 |
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| End bp | 2330233 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643612592 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002509880 |
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| Protein GI | 220932972 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 79 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAAC AACAGCTAAC AGTTAGTGAA GAACTGGCCC GCCGGGTTGT TGATTTTGAG
GTAGTTAGAA ATGTAGGTAT TCCTTCAGAG TTACCCCCGG CAGAAAGGGT TGTCAGTGCC
AATGCCCGGC TTGAAATAAC TGAAGCAACA GCCGGACAGG GGAATGTTGT TATAAATGGA
ATTATCAGGT CTACTATTTT TTATGCCTCT GCAGAAGACC CTTCAAATGT TGTCAGTATC
AGGCGTAATT TTAATTTTAC CGAACGGGTA AACATTCCCG GGGCCAGGCC CGGGGCTGAA
GTAAATGTTG ATGCCAGTAT TGGAGACATT GATTTCTATG TAATTAACAA TAGATTGCTG
GGAATAGAAT TTGTAGTTGT TGCTGACCTG GAAATAACCG TTCCCGAGAC AGTACCGGTT
GTAGAAGAAC CGGAAGAGGT CGAATTCAGG CGTCGTCGAA TCAGGATAAG AAGAACCATT
GTTGAAAGGA ACTTTGTTAG AGAGTTGACT TCTGTTGAAA GGTTACCGTC CGATGCTGAA
GATATAAGGA GAATTATTGA TGTCGAGTCT ACTATTCAAT TAATAGATAT TATAACCGGA
AATAACCGGG TAACCATCAG GGGAGTGGTT AATAACCGTA TTTTATATGT GAACAGGCAG
GGACAGCTGG AGTTTTTCTC TATTTCATTC CCGGTTACTG AAACCTTTAC ATTAAGAGGG
GTTGATCCCG GGGATGAGGC TTTTGTAGAC ACTGTTATCA GGAGTGAGGA AGCAAGTCTT
GTCGACAACA GGAGGATAAG ATTTAATATT ACAGCCCTGT TTAATATCTT GGTAGTCAGG
GAAGAAGAGG TTACAGTCCC GGTCGGGGTT ATTACCCCAG GGGTTTTTCC GGAAAGGAGA
ACTGTTATCG TTGACAGGGT TGTTGCTGAA GAAAGAACCA GGGTTTTAGC CCGGGACCAG
GTCACTGTTC CAGAAGGGAA CCCTGACATT GACCGGGTTA TTAGAGCAAC CGGTCAATTC
ATTGGTGGTA CTGTCAGTGC TGAAACCGCC AGTGGAGGGG TTTTTGTGGA TGGTGAAATT
GCTGTTAATA TTCTTTATGT GGCTGACCTA CCGCAGCAAC CTGTTTACTT TACCTCGACA
GTTATAGACC TCAATACCTT TATAAATATA GAGGGAGTAA CTGCTGATAT GGATGCAGTG
GTAGATGCAG AAGTTGTCCG GGTTTCTGCC AGCAGGGTCA GTGCCAGACA GATTAATGTA
CGGGTAGTGG TTGAACTTAA CCTGGTTGTG ACAGAAAGAG TCAGAATACC CCTTGTTATC
AGGGTTGGAG AAGAGCCGGC TGACGAAGAA GGTTTTATTA CCTATACGGT TCAACCTGGA
GATACCCTGT TTTTAATTTC CAGGAGGTAT GGTGTATCTA TTGCGAGACT GGTTGAAATT
AATAATATTG CCGATCCCGA TAATCTCAGG GTAGGCCAGC AATTATTAAT TCCGGCAGGT
TGA
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| Protein sequence | MPQQQLTVSE ELARRVVDFE VVRNVGIPSE LPPAERVVSA NARLEITEAT AGQGNVVING
IIRSTIFYAS AEDPSNVVSI RRNFNFTERV NIPGARPGAE VNVDASIGDI DFYVINNRLL
GIEFVVVADL EITVPETVPV VEEPEEVEFR RRRIRIRRTI VERNFVRELT SVERLPSDAE
DIRRIIDVES TIQLIDIITG NNRVTIRGVV NNRILYVNRQ GQLEFFSISF PVTETFTLRG
VDPGDEAFVD TVIRSEEASL VDNRRIRFNI TALFNILVVR EEEVTVPVGV ITPGVFPERR
TVIVDRVVAE ERTRVLARDQ VTVPEGNPDI DRVIRATGQF IGGTVSAETA SGGVFVDGEI
AVNILYVADL PQQPVYFTST VIDLNTFINI EGVTADMDAV VDAEVVRVSA SRVSARQINV
RVVVELNLVV TERVRIPLVI RVGEEPADEE GFITYTVQPG DTLFLISRRY GVSIARLVEI
NNIADPDNLR VGQQLLIPAG
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