17 homologs were found in PanDaTox collection
for query gene Ppro_2378 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008609  Ppro_2378  bacteriophage CI repressor  100 
 
 		 209 aa  423  1e-118  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.00068987  n/a   
 
 
-
 
NC_011901  Tgr7_1669  helix-turn-helix domain protein  38.06 
 
 		 163 aa  85.1  7e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1999  putative phage repressor  58.46 
 
 		 247 aa  80.9  0.00000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.148968  normal  0.25035 
 
 
-
 
NC_004347  SO_2652  prophage MuSo2, Cro/CI family transcriptional regulator  31.72 
 
 		 248 aa  65.9  0.0000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0648  prophage MuSo2, Cro/CI family transcriptional regulator  46.67 
 
 		 245 aa  64.7  0.0000000009  Vibrio cholerae O395  Bacteria  normal  0.19  n/a   
 
 
-
 
NC_009457  VC0395_A0789  prophage MuSo2, Cro/CI family transcriptional regulator  46.67 
 
 		 245 aa  64.7  0.0000000009  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000234402  n/a   
 
 
-
 
NC_009784  VIBHAR_06231  hypothetical protein  40.28 
 
 		 139 aa  56.6  0.0000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_0641  prophage MuSo1, Cro/CI family transcriptional regulator  35.38 
 
 		 240 aa  56.6  0.0000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000476  hypothetical protein  40.28 
 
 		 137 aa  56.2  0.0000003  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2067  putative phage repressor  34.23 
 
 		 247 aa  55.1  0.0000008  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000502138  n/a   
 
 
-
 
NC_007643  Rru_A0717  phage repressor  45.16 
 
 		 239 aa  54.3  0.000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1039  putative phage repressor  44.78 
 
 		 311 aa  53.9  0.000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2114  putative phage repressor  33.33 
 
 		 247 aa  52.4  0.000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.00404649  normal  1 
 
 
-
 
NC_007643  Rru_A1024  phage repressor  41.67 
 
 		 265 aa  50.8  0.00002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.277837  n/a   
 
 
-
 
NC_008576  Mmc1_2302  XRE family transcriptional regulator  45.45 
 
 		 230 aa  43.9  0.002  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000000018449  normal  0.913599 
 
 
-
 
NC_008576  Mmc1_3365  putative phage repressor  36.73 
 
 		 215 aa  43.1  0.003  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.193057 
 
 
-
 
NC_007434  BURPS1710b_1643  repressor protein, putative  38.6 
 
 		 289 aa  42.4  0.005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.102671  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>