Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1643 |
Symbol | |
ID | 3689985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 1739515 |
End bp | 1740384 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637728099 |
Product | repressor protein, putative |
Protein accession | YP_333047 |
Protein GI | 76808544 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.102671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTAGCG GGTACTGCAA ACCGGCCTGC GCCGGAACTA CGTCACTGCT TTCATCTTGC TTGCCGGAAC CTGTCGTTTC GGCATGGGAT GAACTTTACG CTTCCATTCG GAAGCATTCC ACTTGGAAAT ATCTATCGCG CGCAATTGTG CTGATAGGAA AATTCCATTG GGATACAGTC CATTTGGATA TACAATCGCG CGTATACGTT ATGGAGGTAT CCCGGATGTC CAGCTATTTT CAGAACTTCT CCGACCGGCT ACGCGAACTA ACTGGGGAGA CGCCCCTCAG TACCACGCTG AAGAAGATCG ACGCAGATCC AAATTGGGCT AAGCCTTATG CGCGTGGAAA TTTGCCGGGT ATGGACGCGC TGGTTGCTAT TGCTGACGCT TACGGCAAGT CCGTAGATTG GCTTATCGGG CGCGAGGACA GCACGCCGAC CCTTGCGCGT ATCCACGGAA GCGACGGGAA ACAGGCCCAG GAATTCGCAT ACATCAAGCG GTACGCAGCG CGGGATGGCG ACCCAGAGAT TACGTTCGCG TTTCGTCGGA GGTGGATCAA GGATTACCTG AAAGCTGAAG TTAGTAATCT CGCGGTCGTT CGTATTGAGG ATGACTTAAT GGCACCAACG TTCCAGCGAC GAGACAACGT ATTGGTTGAC ATGGGTTATC AACACAAACC AGGAAACGGG CTGTACGCGC TGCGACTGGA GGATTCAATC GTCGTCCGCC GTACGCAGAA ACTGAGTAGC GGGAAGCTCC GTATCCTCTG CGAGAACGAG AACTACCCGC CCGACGAGAT ACGGCCTGAT GAGAACGAAT TCGATTTTGA GATTGTTGGC AAGGTCGTGT GGTTCTCCCG CCAGATTTGA
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Protein sequence | MPSGYCKPAC AGTTSLLSSC LPEPVVSAWD ELYASIRKHS TWKYLSRAIV LIGKFHWDTV HLDIQSRVYV MEVSRMSSYF QNFSDRLREL TGETPLSTTL KKIDADPNWA KPYARGNLPG MDALVAIADA YGKSVDWLIG REDSTPTLAR IHGSDGKQAQ EFAYIKRYAA RDGDPEITFA FRRRWIKDYL KAEVSNLAVV RIEDDLMAPT FQRRDNVLVD MGYQHKPGNG LYALRLEDSI VVRRTQKLSS GKLRILCENE NYPPDEIRPD ENEFDFEIVG KVVWFSRQI
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