Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2652 |
Symbol | |
ID | 1170353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2788307 |
End bp | 2789053 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637344477 |
Product | prophage MuSo2, Cro/CI family transcriptional regulator |
Protein accession | NP_718236 |
Protein GI | 24374193 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATATG GTTACGACAA AAATGCGGAC GACATTATGA AAAATGCGGA TCACATTTTT GAAATTAAAG GAATAATGCG ATTTCCAGAT AGATTGAAGG AATCAATAGG TGACATTTCA ATACGCAGCT TTGCGAAGAA ATGTGGACTT TCAGAAGGCG TGATGCGTAA TTATCTAGCG GGTAAAACAT ACCCATCATT AGACAAGCTG GCATTAATGG CTGAGGTTAG TAACAAACCG CTTGATTGGT TGGTTGCTGG CACTGAACAC AACTTCAATG AACTGAATGA ACCTGGTTCT AAATATGTGA TTGGAATTAA TCTAGAAGAG TATGCCTTAA TCCCTGGCTA TCGTGTGCAA GTATCAGCAG GCCATGGCGC GCTCAATTGC GATCAACAAG ATCCAGTAAG ATATTTAGCA TTTAGACGCA AATGGTTGAA GTACAGAGGG TTTGAAGAAC ATGAGTTAGC CATTGTATGG GCTAAAGGTG ACAGCATGGA ACCGACGATC CACAGCAACG ATACGCTTGT AGTTCACCTT GGCCGTAATA GCCCCGCCGA TGGCCACATC TACATTTTTA GAAATGGTGA TGACCTATTT GTAAAGCGGT ACCAGAACGC CTTCGGCAGC TGGCGCTTGA TAAGTGACAA CCCAGTCTAT GACAAACTGG ATATCCCTAA GCATGAGCAA CATCAGTTTG AGGTAGTAGG CCAGGTGGTG CATATTGCCA AAGATATCGG CGACTAG
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Protein sequence | MSYGYDKNAD DIMKNADHIF EIKGIMRFPD RLKESIGDIS IRSFAKKCGL SEGVMRNYLA GKTYPSLDKL ALMAEVSNKP LDWLVAGTEH NFNELNEPGS KYVIGINLEE YALIPGYRVQ VSAGHGALNC DQQDPVRYLA FRRKWLKYRG FEEHELAIVW AKGDSMEPTI HSNDTLVVHL GRNSPADGHI YIFRNGDDLF VKRYQNAFGS WRLISDNPVY DKLDIPKHEQ HQFEVVGQVV HIAKDIGD
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