Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3365 |
Symbol | |
ID | 4482807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4192600 |
End bp | 4193247 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724113 |
Product | putative phage repressor |
Protein accession | YP_867257 |
Protein GI | 117926640 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.193057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCCG CATTATCCCA ACGCATTCGG CAGTGTGCCC AAAAGGTTGG CAGTGGCGAT ACGCTGGCCC GCCTGAGTGG TATTCCCCGG CGCACCATCG AAACCTATTT GACCGGCCAG TCTGAACCAA AAGCATCCCG CTTGGTGGCG ATTGCACAAG CGGCTGATGT GGATGTTGGT TGGCTGGCTT GCGGGCAAGC CAGCCAGATG GAATCAAGCC TGCCTGACGA TGAATATACG CTGGTGCCCC GTTATGCGGT GGAGGCCAGC GCAGGGCATG GTGGCGCCAT TGATGAAGAG CCCATTGTGG AAAAATTGGC CTTCAAATCC GACTGGATCA TTGGTGAAAT GGGGCTCGAT AGTGAGCGTT TAGCGCTGAT AAACGTCCAT GGCGATAGCA TGGAACCCAC CTTGCGCGGT GGTGACATGC TGCTGTTGGA TCTGCGCCGG GTGGAGGTGC GCGATGATGC CATTTATGTC TTGCGGTTGG AAAATCATCT TATTGTCAAA CGCGCCCAAC GTATGCTGGA CGGCACCATT TTAATTCGCA GTGACAATCC AATTTATAAA GAGCAGAGCG CCTCGCCCGA GCAAGCCCGT CAACTGTGCG TTATAGGACG AGTGGTGTGG GTAGGGCGTC GCATCTAA
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Protein sequence | MHAALSQRIR QCAQKVGSGD TLARLSGIPR RTIETYLTGQ SEPKASRLVA IAQAADVDVG WLACGQASQM ESSLPDDEYT LVPRYAVEAS AGHGGAIDEE PIVEKLAFKS DWIIGEMGLD SERLALINVH GDSMEPTLRG GDMLLLDLRR VEVRDDAIYV LRLENHLIVK RAQRMLDGTI LIRSDNPIYK EQSASPEQAR QLCVIGRVVW VGRRI
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