| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1669 |
|---|
| Symbol | |
|---|
| ID | 7316982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1768411 |
|---|
| End bp | 1768902 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643616561 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_002513739 |
|---|
| Protein GI | 220934840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACG CCGAATCAGG ATCAGAGAGT GAGGGTTCAG GTTCTTCACC TGAACTTGAG
TGCGGATTTT CGGGCAGGCT CAAGCAGGCC ATTGGTGCTA GATCGGTCCT TTCGTTCGCC
AAGGAGTGCG GGATAAGCGA CAGCCTGGTG CGAAAATACC TAGCTGGCTC GCACCCTGGT
TTGGATAAGG CTGTAGTGAT GGCGCGGGTC GCGGGCGTAT CACTGGAGTG GCTGGCCACG
GGCGAGGGTA GCTCCGATAA AGGGGCGCAG ACGCCCGCTA AGCAAGGCTT TGCTGGGGGC
GAAATCGATT TAGATTTACT CGAGAGCGTG GCGGCCACCA CGCTGCAGGA GCTGGAAACG
CGGCGCATCC ACCTGGAGCC CGCCGCCCAG GCACGCCTGC TGCGGGTGCT GTACCGCCAC
TTCGCCAGCC GTCACGAACA GCCGGACCAC GACACGGTAA GCAACATCAT TGATCTAGCC
GCATACCGAT AG
|
|---|
| Protein sequence | MLNAESGSES EGSGSSPELE CGFSGRLKQA IGARSVLSFA KECGISDSLV RKYLAGSHPG
LDKAVVMARV AGVSLEWLAT GEGSSDKGAQ TPAKQGFAGG EIDLDLLESV AATTLQELET
RRIHLEPAAQ ARLLRVLYRH FASRHEQPDH DTVSNIIDLA AYR
|
|---|
| |