Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2114 |
Symbol | |
ID | 5753864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2526535 |
End bp | 2527278 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641288400 |
Product | putative phage repressor |
Protein accession | YP_001554543 |
Protein GI | 160875227 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00404649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGG AAGCCTTACA TTCAGATCCA ACTTTAGATC CGACTTCCAC AACTGAAGTC GGCACTCTTG CTGACCGTAT TTCGGAAGCA ATTGGGAAAA ACAGTATTAG AGAGTTCGCC ATTAAAATTG GCGTATCTGA AGGTACCCTA CGTAATCTAA TCAAAGGTGG AGAACCTAAG TTAGATACCG CAATACGTAT AGCAGAAGAG GCTGGCGTGA GCATTCGTTG GCTTGCAACT GGCAATGGCC CTAAATACCC GAATCGCCAA CGCGATGACA TTTCCCAGGA AGGTATTGTT TACGTCCACC AAGACCAGTT CAATGAAGAG TATTTCTTGA TTGAAGGCTA TGACGTGGTG GTAAGCACTG GGCATGGCGC GTTTAATGAT GAAACAGGTG TACGCAGACG GCTGCCGTTT AGAAAGAACT GGCTTAAATA CCGTAGTTTA AAGCCCGAGA ATCTTAAAGT CGTCTATGCC AAAGGCAATT CGATGGAGCC CGCCATACAC AGCGGAGATA GCTTACTGGT CGATATCAGC AAGACTACGC TAGAAGACGG CTGTATCTTC GTATTACGCC TGGGCGACGA TCTTTACGCC AAGCGCTTAC AGAAACTATT TGATGGCGGC ATAGAGATAC TCAGTGACAA CAAGGAGTAT AAATCTCAGA TTGTCTCTGC GGGTGAACTG CCAATGCTGC AAATTATTGG CAAAGTCGTG TGGATGGGTA AAAACCTCGA TTAA
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Protein sequence | MKSEALHSDP TLDPTSTTEV GTLADRISEA IGKNSIREFA IKIGVSEGTL RNLIKGGEPK LDTAIRIAEE AGVSIRWLAT GNGPKYPNRQ RDDISQEGIV YVHQDQFNEE YFLIEGYDVV VSTGHGAFND ETGVRRRLPF RKNWLKYRSL KPENLKVVYA KGNSMEPAIH SGDSLLVDIS KTTLEDGCIF VLRLGDDLYA KRLQKLFDGG IEILSDNKEY KSQIVSAGEL PMLQIIGKVV WMGKNLD
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