12 homologs were found in PanDaTox collection
for query gene Ppha_2162 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011060  Ppha_2162  transcriptional regulator, Fis family  100 
 
 		 298 aa  595  1e-169  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.111868  n/a   
 
 
-
 
NC_008639  Cpha266_0858  Fis family transcriptional regulator  46.56 
 
 		 298 aa  203  4e-51  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.487763  n/a   
 
 
-
 
NC_010803  Clim_0746  TonB family protein  42.14 
 
 		 316 aa  175  7e-43  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000019388  n/a   
 
 
-
 
NC_007514  Cag_1909  hypothetical protein  39.03 
 
 		 314 aa  164  2.0000000000000002e-39  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_0613  TonB-like  39.33 
 
 		 286 aa  130  3e-29  Chlorobium luteolum DSM 273  Bacteria  normal  0.543734  normal  1 
 
 
-
 
NC_011059  Paes_0749  transcriptional regulator, Fis family  31.44 
 
 		 285 aa  122  9e-27  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.0027337  normal  0.178173 
 
 
-
 
NC_010831  Cphamn1_1712  hypothetical protein  32.86 
 
 		 280 aa  120  3e-26  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0852036  hitchhiker  0.00264543 
 
 
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NC_009943  Dole_2211  TonB family protein  27.17 
 
 		 274 aa  60.8  0.00000003  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.00000000585223  n/a   
 
 
-
 
NC_009483  Gura_0204  TonB family protein  25.86 
 
 		 245 aa  52.8  0.000007  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000615239  n/a   
 
 
-
 
NC_006369  lpl1453  hypothetical protein  32.67 
 
 		 332 aa  48.5  0.0001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp1530  hypothetical protein  32 
 
 		 332 aa  46.2  0.0006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_2276  TonB family protein  24.26 
 
 		 336 aa  42.7  0.006  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.000987559  n/a   
 
 
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