| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2211 |
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| Symbol | |
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| ID | 5695057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2683291 |
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| End bp | 2684115 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264815 |
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| Product | TonB family protein |
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| Protein accession | YP_001530092 |
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| Protein GI | 158522222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000585223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTT CTTACCATGC ATCGCTTCTG GACGACCGGC ATACCGGTTC CGGCTCTTTT
GCCGCCTGGA TGTCGCTCTC CTTTGGATTT CACCTGCTGG TACTGGTGCT GCTGGTGGTT
TCGGGAAGCT ATTCGGGATG CCAGAAGCGC TCATTTCCCA TGGGCGCCAT CAGCGTGGAC
CTGGTCTCTC TTCCCGGCCC GGCTTCAGGG CCGTCAAAAC CGGCGGCCGT CGCAGGCAAG
ACAGCCCCGG CCCCGGCCCC GCCGGTCAGG GAGAGCAAGG CCCCGGCCTA TGAAAAGCCG
GCGGTGGTGC CCAAACCCAA AGCCGCGGTA TCGACAAAAA AGAATACCGC GCCGGTCAAG
GCTTCGCCCA GGACCGCCCC GGCAGCGGCC CCGGAAGCCG AAGATACGGG TGATGCCGAA
CTGGCCAAAA CCCTTGCCGA TCTTGAACAG AAAGTGAGCC AGACCGAACA GAACGTCAGC
ATTTCCGGCC AAAGCAACGG ACCGGCCGGT GGCGGCGGCA CAGGCGCCGG TGGCGGAAGG
GCGGCCAGCG CTCTTGAAAT CTACAATGTG GAGATGGGGT TTCAGATTCG AAAAAACTGG
GTTTCCCCCA TGGGCGTGGA TGAAAACCTG CAGGCGGTGA TCGCCATTCA TATTGCCGCC
GACGGTAGCC TCATGGACCT GCGGTTTGAA AAGCGGTCGG GCAATGACAC CTATGACGAG
TCGGCCCGCA AGGCCATTCT CAAGTCCGTG CCCCTGCCGC CCCTGCCAAA GGGGTTTGTG
CTGCACAGGG TAAATCTTGA GTTTACGCCG AAAGACGCCC GATAA
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| Protein sequence | MAVSYHASLL DDRHTGSGSF AAWMSLSFGF HLLVLVLLVV SGSYSGCQKR SFPMGAISVD
LVSLPGPASG PSKPAAVAGK TAPAPAPPVR ESKAPAYEKP AVVPKPKAAV STKKNTAPVK
ASPRTAPAAA PEAEDTGDAE LAKTLADLEQ KVSQTEQNVS ISGQSNGPAG GGGTGAGGGR
AASALEIYNV EMGFQIRKNW VSPMGVDENL QAVIAIHIAA DGSLMDLRFE KRSGNDTYDE
SARKAILKSV PLPPLPKGFV LHRVNLEFTP KDAR
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