| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2162 |
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| Symbol | |
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| ID | 6462180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2245486 |
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| End bp | 2246382 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728358 |
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| Product | transcriptional regulator, Fis family |
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| Protein accession | YP_002018982 |
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| Protein GI | 194337188 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.111868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA GTCGTAATCA TGTTTCTGCA GAACAAAAGT TTTTGCTTTG GCTTGTTGCT
GCGGCAGTAA TGCATGCCAT GGTGTTTTTT TTAGCTGTTT ATCTCCAGTT ATGGGATGCT
GGCCGGCATG TCAAGCTGAA AATTGTGAGT GTCTCTCTTG TTTCCCTACC CGGTTCCGGT
GGTTCGCCTC AACGATCTGA AGGGAAGGGT GGTAGTACCG AAGCACCCTC TGCAGAGCCT
CAAATCAATA CTCCTCCCCC TGTTGTCAAC AAGGTCGTTA AGGAGGCGTT GCCGGAAAAA
CCGCAGCCGC CTGCCCTTAA GCAGGTTGTT GTGGAGCCTC CAAAAAAAAT TTCTGTGGAA
CCACTGAAGC CGAAGGTTGT TGAAAAGCCC TCTGATATGA GTACAGCTCT TCAGCGGCTC
AAGCAAAACA TTGAAAAGAA AACAGCGCAA TTACCGCAAC CATCTGCCAG TGCTTTGAAC
AAAGCGCTTG CGACGCTTCA GCAGAAGGTG AGCTCTGATA AACAGCCTTT GCAGGGTAGT
GGCGGCGGAA AACCCGGCTC GTCCGGTGGC AGAAGTGGTG CGGGAAAGGG GAGTGGTGGT
GGTGGAACTG CAGATCCCTA TAAAGCTGAA ATTGCGTCAA TTATTCAGCG GAACTGGGTT
TTTTCCGGGC AGATGCTGAA AAACAGTTAC GGCATGAGTG TCTATGTTCG TATTAACATT
ATTGCTGATG GGACGATTCG CCAGATTATT TTTGATAAGA GGGCGCCAAG TGAATATTTG
AACAGTTCAG TAAAAAAAGC CCTTGAAAAA TCATCACCTC TTCCTGTTTT GCCGAAAGAG
GAGGGGTTCA GGGATGTTTG GATTGGATTT GTGTTTACTC CGGAAGGTAT TGAGTAG
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| Protein sequence | MKKSRNHVSA EQKFLLWLVA AAVMHAMVFF LAVYLQLWDA GRHVKLKIVS VSLVSLPGSG
GSPQRSEGKG GSTEAPSAEP QINTPPPVVN KVVKEALPEK PQPPALKQVV VEPPKKISVE
PLKPKVVEKP SDMSTALQRL KQNIEKKTAQ LPQPSASALN KALATLQQKV SSDKQPLQGS
GGGKPGSSGG RSGAGKGSGG GGTADPYKAE IASIIQRNWV FSGQMLKNSY GMSVYVRINI
IADGTIRQII FDKRAPSEYL NSSVKKALEK SSPLPVLPKE EGFRDVWIGF VFTPEGIE
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