12 homologs were found in PanDaTox collection
for query gene Pden_1706 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008686  Pden_1706  quinohemoprotein amine dehydrogenase, subunit beta  100 
 
 		 358 aa  726    Paracoccus denitrificans PD1222  Bacteria  normal  0.472074  normal  1 
 
 
-
 
NC_007492  Pfl01_2972  quinohemoprotein amine dehydrogenase, subunit beta  45.4 
 
 		 362 aa  343  2.9999999999999997e-93  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_2942  quinohemoprotein amine dehydrogenase 40 kDa subunit  32.09 
 
 		 373 aa  167  2.9999999999999998e-40  Pseudomonas putida W619  Bacteria  normal  0.818526  normal  0.105039 
 
 
-
 
NC_010322  PputGB1_2478  hypothetical protein  31.79 
 
 		 373 aa  162  1e-38  Pseudomonas putida GB-1  Bacteria  normal  0.124599  normal  1 
 
 
-
 
NC_009512  Pput_2310  hypothetical protein  32.07 
 
 		 373 aa  160  3e-38  Pseudomonas putida F1  Bacteria  normal  0.231915  normal  1 
 
 
-
 
NC_002947  PP_3459  hypothetical protein  31.4 
 
 		 379 aa  159  1e-37  Pseudomonas putida KT2440  Bacteria  normal  0.876631  normal  0.354488 
 
 
-
 
NC_011662  Tmz1t_0764  quinohemoprotein amine dehydrogease,beta subunit  30.5 
 
 		 378 aa  152  1e-35  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2979  quinohemoprotein amine dehydrogenase 40 kDa subunit  31.59 
 
 		 376 aa  137  4e-31  Thauera sp. MZ1T  Bacteria  normal  0.49844  n/a   
 
 
-
 
NC_007794  Saro_3031  hypothetical protein  21.72 
 
 		 366 aa  48.5  0.0002  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.00944915  n/a   
 
 
-
 
NC_011666  Msil_3498  40-residue YVTN family beta-propeller repeat protein  24.67 
 
 		 540 aa  48.5  0.0002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0631028 
 
 
-
 
NC_013501  Rmar_0629  peptidase S9B dipeptidylpeptidase IV domain protein  25.94 
 
 		 1028 aa  44.3  0.003  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A0162  hypothetical protein  25.75 
 
 		 387 aa  42.7  0.01  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>