14 homologs were found in PanDaTox collection
for query gene PputGB1_2478 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_3459  hypothetical protein  95.44 
 
 		 379 aa  749    Pseudomonas putida KT2440  Bacteria  normal  0.876631  normal  0.354488 
 
 
-
 
NC_009512  Pput_2310  hypothetical protein  95.71 
 
 		 373 aa  751    Pseudomonas putida F1  Bacteria  normal  0.231915  normal  1 
 
 
-
 
NC_010322  PputGB1_2478  hypothetical protein  100 
 
 		 373 aa  777    Pseudomonas putida GB-1  Bacteria  normal  0.124599  normal  1 
 
 
-
 
NC_010501  PputW619_2942  quinohemoprotein amine dehydrogenase 40 kDa subunit  90.35 
 
 		 373 aa  710    Pseudomonas putida W619  Bacteria  normal  0.818526  normal  0.105039 
 
 
-
 
NC_011662  Tmz1t_0764  quinohemoprotein amine dehydrogease,beta subunit  59.18 
 
 		 378 aa  440  9.999999999999999e-123  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2979  quinohemoprotein amine dehydrogenase 40 kDa subunit  37.94 
 
 		 376 aa  258  1e-67  Thauera sp. MZ1T  Bacteria  normal  0.49844  n/a   
 
 
-
 
NC_008686  Pden_1706  quinohemoprotein amine dehydrogenase, subunit beta  32 
 
 		 358 aa  160  4e-38  Paracoccus denitrificans PD1222  Bacteria  normal  0.472074  normal  1 
 
 
-
 
NC_007492  Pfl01_2972  quinohemoprotein amine dehydrogenase, subunit beta  30.51 
 
 		 362 aa  157  2e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007355  Mbar_A1242  hypothetical protein  36.84 
 
 		 810 aa  51.2  0.00003  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_2474  serine/threonine protein kinase  38.1 
 
 		 776 aa  46.6  0.0006  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.0000122678  hitchhiker  0.00951365 
 
 
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NC_010172  Mext_1838  YVTN beta-propeller repeat-containing protein  30.1 
 
 		 366 aa  45.8  0.001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6378  hypothetical protein  25.15 
 
 		 556 aa  43.9  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.355816 
 
 
-
 
NC_011898  Ccel_1651  40-residue YVTN family beta-propeller repeat protein  31.87 
 
 		 366 aa  43.5  0.006  Clostridium cellulolyticum H10  Bacteria  normal  0.0495995  n/a   
 
 
-
 
NC_010524  Lcho_1794  YVTN beta-propeller repeat-containing protein  23.4 
 
 		 338 aa  42.7  0.009  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000588252 
 
 
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