Gene Pfl01_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2972 
Symbol 
ID3712343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3410442 
End bp3411530 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content51% 
IMG OID 
Productquinohemoprotein amine dehydrogenase, subunit beta 
Protein accessionYP_348703 
Protein GI77459197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGT CATCCTGCTT CGCCGTGCTG TCGGTAATCG CTGCAATGGG CGGCGTAACG 
CCTGCCGTGG CTAAAGATTT TTTGTCGGTG GTCGCGCACC CTGACAAAGT GTTCGTTGTG
GACATGGACA ACCGCAAGAT CCTCAAAGAA TTTGTCGTTG AAAACAGCGG TGCTACGCCA
ATTGTTTCCG CAGTAAGCCC TGATGCCAAA TATGTATACG TCTTGGCGAA TGGAAGCCAA
AGCGTCATAA AGATGGACAT GGAAACCGGA AAAAACCTGC TCCGATTGGA CATGAGCAAA
GCCGACGAGC GTGTCTGGGC GACGTGGGGC ATGAATCTTT CGCCCGACGG CAAGACGCTC
GCGGTGTATC AGAATCCGGT AAAACACCTG CGCAACGAAT TCAAAGTCCA ACCCACGCGC
ATTGCGTTAT ACGACGCGGA AACGTTGACG TTGAAATCAA CAGCTCCTGC CCCTCGTCAA
GTGACGATGT TGATGTACTC GACTGATGGG AAAAAGATTT ATGCGTTGGG CAAGGATATG
TATGTCTTCG ATGCCGAATC GGGAAAGCAA TTGGAGGAAA TGCCTATCCA GAAATGGTCG
CAAAAGGATC ATTTTCCCCC CGATATGCTG AACGTCTGGT ATCAGTACGA CAACTCTCAG
CTCATGGTCG CCCCGTACTA CGTCAAGTTG CGCAATAAAG ACCCCGCGTC CCCTGAAACA
TTCCAAACGG GGCTGCTTAC TCTTGATCTG AAGAAGGGCA AGTTGCACAT GAGGGATATT
GAACCCACCC AGACCATTTA TTTCTCCATG GCGGCTAGCC CGGACCAAAA GCGTGCGTAT
GCGGTTTATA ACGTGCTCCA GTCTTTCGAC TTGGAACAGG GTGGCAAACC CCTCAAGCAA
GTAAGCCTTC CCCATACGTT TTATTCCGTC GCCGTCAGCT CCGATAATAA ATATGTCTGG
ATTGGCGGTG CGGGTGGCGA TCTGCTTATT TATGACGGCG CGAGCTTGGA AAAGGTCGGG
GAGGTCAAGT TGCCCGGTAA CCCCAACATG TCGAACAACT CAGCCCTGCG ATTGTTCACG
GTTCAGTAA
 
Protein sequence
MIKSSCFAVL SVIAAMGGVT PAVAKDFLSV VAHPDKVFVV DMDNRKILKE FVVENSGATP 
IVSAVSPDAK YVYVLANGSQ SVIKMDMETG KNLLRLDMSK ADERVWATWG MNLSPDGKTL
AVYQNPVKHL RNEFKVQPTR IALYDAETLT LKSTAPAPRQ VTMLMYSTDG KKIYALGKDM
YVFDAESGKQ LEEMPIQKWS QKDHFPPDML NVWYQYDNSQ LMVAPYYVKL RNKDPASPET
FQTGLLTLDL KKGKLHMRDI EPTQTIYFSM AASPDQKRAY AVYNVLQSFD LEQGGKPLKQ
VSLPHTFYSV AVSSDNKYVW IGGAGGDLLI YDGASLEKVG EVKLPGNPNM SNNSALRLFT
VQ