| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2979 |
|---|
| Symbol | |
|---|
| ID | 7874369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3226324 |
|---|
| End bp | 3227454 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643699900 |
|---|
| Product | quinohemoprotein amine dehydrogenase 40 kDa subunit |
|---|
| Protein accession | YP_002889955 |
|---|
| Protein GI | 237653641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.49844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA TCCCCGACCT GCGTGCGCTG CGGGCAGCCG GCGCGATCGC CGCCGCGGCG
CTCGCGACCG CGTGCGCGAC CCCGGCGCAG AAATCCGCGA CGAGCGACGC GGAGTACCTG
CTCACCGTCA CCCGGCCCGG CCTGCTCCAC GTCATCGACA TGAAGACCGA CCGCATCGCG
CGCAGCTGCG AGCTGCCCGG CAAGTTCGGC TCGGGCGCGC TGGTGCCGAC GCGCGACGGC
CGTCACGCCT TCGTGCTCGG CAACCTGTGG GAGGACGTGT ACGGCTTCGA GCTCGAGACC
TGCAAGCTGG TGTTCTCCGC CCGCCAGTCG GAAGGCGACG TCACCGTCAA GACGGTGCAG
TCGCTCGCGG TGAGCGCGGA CGGCAGCGAG CTGTACACCG TGCAGAACCC GGTGCGCCGC
GGTGCCGACC GCTTCGAGGT GCTGCCGCCG CGCCTCGCGG TATATCGCAT CGCCGACGGG
CTGGACGCCA AGCCGGTGCG CAGCTTCCCG GTCAAGCGCC GCATCACCAA GATCGCCGCC
ACCGCCGGCG GCGAGGTGAT CCTCGGCGGT GCCGACGTGG AGGCGATCGA CGTGCGCAGC
GGCGCGGTGC GCACCGTGTC GGCGCTGGCG AGCTGGGACC GCGGTCCGCG CTGGCTGACG
CCGGACGCGT TCGCGATGCA CTCGCAGGGC GAGCATCTGA ACGAGTACGT GATGCCCTAC
GTGACCGCGA AGTTCGCCGA CGACCGCCAG GACATGGCGA GCGCCGAATG GTGGTGGGGC
ATGAGCCGGG TGGACCTCGC GACCGGCAAG GCCGAGGCGC GCGAGATCTT CCCCTTCGAG
TTCGTGATCT TCTCGCTTGT CGCCGATCCG CGCGATCGCA ACATCCTCTA CGGCGCCTTC
AATACGCTCT CCAGGCACGA CATCGAAAAG CGCGAGACGC TGAAGGTGGT GGAGCTCGAC
CACACCTACT ACAGCCTGCA ACTGTCGCGC GACGCCTCGC GTGTTTACGT CGGCGGGGCG
GGCAGCACGA TCAGCATCCA CGACAGCGGC ACGCTGGAGA AGATCGGCAC GATCCAGCTC
CCGGGCGACA TGTCGACCGC CGACGTGCGC GTGGCCTGGC GGCGCCCGTA G
|
|---|
| Protein sequence | MSLIPDLRAL RAAGAIAAAA LATACATPAQ KSATSDAEYL LTVTRPGLLH VIDMKTDRIA
RSCELPGKFG SGALVPTRDG RHAFVLGNLW EDVYGFELET CKLVFSARQS EGDVTVKTVQ
SLAVSADGSE LYTVQNPVRR GADRFEVLPP RLAVYRIADG LDAKPVRSFP VKRRITKIAA
TAGGEVILGG ADVEAIDVRS GAVRTVSALA SWDRGPRWLT PDAFAMHSQG EHLNEYVMPY
VTAKFADDRQ DMASAEWWWG MSRVDLATGK AEAREIFPFE FVIFSLVADP RDRNILYGAF
NTLSRHDIEK RETLKVVELD HTYYSLQLSR DASRVYVGGA GSTISIHDSG TLEKIGTIQL
PGDMSTADVR VAWRRP
|
|---|
| |