9 homologs were found in PanDaTox collection
for query gene PXO_04681 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_4296  carbohydrate-binding family 6 protein  64.86 
 
 
767 aa  963    Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_04681  putative secreted protein  100 
 
 
700 aa  1442    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2950  Pectate lyase/Amb allergen  35.04 
 
 
554 aa  56.2  0.000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.821566  n/a   
 
 
-
 
NC_011898  Ccel_3240  protein of unknown function DUF291  27.62 
 
 
2073 aa  53.9  0.00001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3707  Carbohydrate binding family 6  30.34 
 
 
1000 aa  49.3  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.176968  normal  0.212982 
 
 
-
 
NC_014210  Ndas_1008  Pectate disaccharide-lyase  30.1 
 
 
540 aa  49.3  0.0003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3464  Carbohydrate binding family 6  29.44 
 
 
649 aa  48.1  0.0005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.235288  hitchhiker  0.0024319 
 
 
-
 
NC_007912  Sde_0942  ribosomal protein L18  36.67 
 
 
769 aa  45.4  0.003  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00000113865  hitchhiker  0.00163221 
 
 
-
 
NC_010571  Oter_4535  carbohydrate-binding family 6 protein  29.41 
 
 
898 aa  45.4  0.003  Opitutus terrae PB90-1  Bacteria  normal  0.334196  normal  0.875686 
 
 
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