Gene Ccel_3240 details

Gene Information

• Locus tag: Ccel_3240
• ID: 7311819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: -
• Start bp: 3779339
• End bp: 3785560
• Gene Length: 6222 bp
• Protein Length: 2073 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643610141
• Product: protein of unknown function DUF291
• Protein accession: YP_002507509
• Protein GI: 220930600
• COG category: [R] General function prediction only
• COG ID: [COG3940] Predicted beta-xylosidase
• TIGRFAM ID: [TIGR02543] Listeria/Bacterioides repeat

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAAGA AAAGTTTAGT TATGTTATCA TTGGCGATAG TACTATCGTT ATTGCTGACA 
AGCATTTCTT ATGCAGATGT AACATCTAGT TACCAAAATC CGCTTATGCG CGGAGCTGAC 
CCTACGATTG CAAGGGCTGC AGATGGATTT TATTATTCTT GTTTCGCTGT TGACAATGAT 
ATCTATTTAA AGAAAGCAGA CACGATCCTC GGGGTGGGAA CTGCAAAAAG CAGGCTGGCT 
TGGGACAAAC CGGCTGATTT CGGGTACGTG TGGGGGCCAT ACATCTATAG ACTGGATGGT 
AAATGGTACA TTTATTTTAC ATCAGCCCCG GAGAATAGCT TTGGTTATGG GCATCCAAGT 
TCCTATGTAC TGGAAAACAC ATCTCCTGAT CCTTTTGAAG GAACCTGGGA GCTCAAGGGT 
GTTTCAGCTA ATGCAGACGA AGATGGTCAG GTTACGGATA AGCCTGGACT CCTGAATACT 
CAAGGCTATG GTTTGGCCTG CGGCGTTGTA ACCATGGGAG GGAAAACATA TTTCACTTAT 
ACAAAGTACT TCTATTACCC TGACCCTAAT GATCCTACAA AAGAAAAATT TGACGAGTGC 
CCTACAATTG TAGAAATGGA GAATCCATGG ACTTTAAAAG GGACAGAAGG TACCCTGGCT 
CGTCCGGTAT ATGATTGGGA AAAGCAAGGC GACAGCATAA ATGAAGGTGC AGCGGTAGTT 
GAAAGAAACG GGAAAGTGTA CTTTGCATAC TCTGCAAGCA GCTTTATGAA TGACAACTAC 
TGTGTTGGAG TCTCGACAGC AGATGCACAA AGTGACTTGT TACAAGAAAG CAATTGGACA 
AAAAACCCTG AGCCTGCACT GGCGAAATCA CCTGAAAACA GTTCTTTTGG CCCTGGCTCA 
CCTTTATTTG TAAAATCAGA AGATGGAACA GAGGATTGGC TTATATATCA TGGCGGTCCT 
GTGGGCGGAC AAACTGGTTC AAACAGATGG GTAAGGGCTC AGCGTATCAA TTGGAACGAT 
GATGGCTCCA TAAATCTCGG CATTCCGTCC AACCCCGGAA CTGTTCTTGA CAGACCGTCA 
GGTGAGGAAA AAAGCGAGAC TTACGAAGCA GAGGATGCTT CATTCGCAGG CGTAACAAGA 
ACAATTCTGA GTGACAGTTC TAAGGCTTCG GGAAGCGGAG TTATGAAATA TGATAACAGC 
AGTAATGGAT ATGTGGAATT TACAGTAGAT GCCAATATGC CAGGTAGCTA TTCCCTGAAT 
TTCAGATATA ACAACAGTAC AGGCAGTAAT ATTACAATGA GTCTGGGAGT AAACCAGAAT 
AGCAGCAGGG AGCTTTCCTT TGAGCCAAAT GGAAGCAATA GTACAAACTA TGATCTCCTT 
AGAGTTCATA ATGTTCAACT TAATGCAGGA CACAATAAAA TCCGACTGTC TTCAAGTGAA 
GCAAACGGAT TGGTATTGGA TGCAATGATT ATTAAAAAAA GTGTATTGTA TGAAGCAGAA 
AATGCTGCAT TATCTGGAGG TGCCTTGGTA AGTACCGAGC ATAGCGGCTA TAGCGGAACT 
GGATTTGTGG GAGGAATGTA TACTGAAGGA ACTTCGGCTG AGTTTACGGT AGATGCTCCT 
TATGCCGGGA ACTATTCAGT TAATCTGCGT TACTGCAATG GATTTTCTAA TATAGATAAG 
ACCTTAAGTA TGTATGTAAA TGGCGTGAAA GTTAAGCAAA TAGATTTATT TAGTTTCGGA 
GACTGGAGCA AATGGTCTGA GCGCTATGAC AATATTGAAC TTAGAGCCGG AAGCAATACT 
ATTACATATA AATATGACAG CGGCGATGGT GGTAATGTAA ATCTTGACTA CATAACTGTA 
ACCGAAGCAA CTACAAGACA TTATGAAGCA GAAAATGCAG TTCTTACGGG AAATGCACAA 
AAAAGTACTG ACCATACCGG CTATACCGGG ACAGGATTTG TAGGCGGGTT TTGGACTGAA 
GGCTCAGTGG AATTTTCAGT AAATGTTGAG ACTGCAGCTT TATATGATGT AAAACTAAAA 
TATGCACTCG GATTTCCTGA AGACAGGACT ATGAGTATAT ATTTAAACGG TTCTAAAGTT 
AAACAGGTAA CACTGCCAAG CACCGGAGGG TGGGATACTT GGAGTGAATA CCTGGAAACG 
TTAAGCTTAA ATAAAGGAAA TAATACAATT TCAATTAAAC GTGATTCTGA TGATTCGGGT 
GATATAAATA TTGACAGTAT TCATCTTGAC AGACGTATAT CATGGAAGTA TCAAGCTGAA 
GACGCTACCC TGCTGGGAGG AGCACACCCT GTCGATGATC ATTTATGGTA TGAGGGGACA 
GGCTTTGCAG GCGGCTTTGA GACCTTATAT GAATCAATCC AGTTTAATGT AAATGTGCCT 
AATACTGCAA CATATACTAC AACCTTAAGG TATTCGGGAG CACAGGAAAA TGATATAACC 
ATGAGCCTGT ATGTGAATGG AACGAAAATA AAACAGGTCT CATTACCGCC AACAGCGGAC 
TGGGATTCTT GGGGTGAGGC TACAGAGACG GTAAATCTGA AGGCCGGGAA AAATGTGATT 
GAATACAAAC GTGATGATGG TGATACAGGA AGATTTAACA TTGATAGTAT GACAATTGAC 
AAATACAGCG TCGGAGACAC CGATTTAAAG AACAGAGGTA TAGTCTCTGG AACGGTATAT 
ACAATTAAGG CAAAGCACAG CGGAAAAGCA TTGGATGTAT CTGGTTATTC ATCAGAACCG 
GGAGCATTGG TTGACCAATG GACTTATGTA GGTGGAAATA ACCAGAGATG GGAAATCATT 
GACCTTGGAA CAGGTTACTA CAAAATAAAA TCTGCACATA GCGGACTTGT ACTTGATATT 
GTAGAGGGAT CACCCGATAT GGATCTATGT CAAACAACTT CCAGTCCAGC AGAAACCCAA 
CAATGGATCC TTGAAAAAGT GGGCGGTTAT TACAAAATTG TTAACAAAAG TAATGGAATG 
GTACTGGACG TAAGTGAAGA ATCCTACGAT AACGGTAAAA AAGTGCATTT GTACTCATAT 
GTAGGTAAGG CTAATCAGCT TTGGAAAATA GATGTTGCTT CAGCAAATGA GTTATTTATA 
CCTGTAACGG GCATAACTGA TGTTCCGGTT ACTGCGACGG CAGGAACAGA TTTGACGCTC 
TTTGCAAATG TTCTTCCTTA TAATGCTACA AACAAAAGTA TCGAATGGAG AGTAAAGGAT 
GCTGGCGAAA CCGGGGCAAC TATCAGCGGT AACACTCTGT CAACAGTGGG AGCAGGAACG 
GTTCTGGTTA CCGCAGTTAT CACTGACGGG ATGCCGGACG ACAATGCATA TACACAGGAC 
TATATTATTC AGATAAATGC TGTAAACCAT GCTCCTACAG CGAAAGCGAA TATTCCTGTA 
GCAGCTGTAG CAGCGGATGA CAGTGTAAGC TTCATAGCAT CAGACATTGC AGAGGACGAG 
GACGGTGACA CTCTGACCAT TGCAGAGATT AAAACCTCAC CCGATTCAGC TATGGCTTCG 
GCAATTTTGG ATAACGGTAC TGTGACTGTC AGCGGAGTGG CTCCGGGCAG CACTGATGCC 
ACATTAGTTG TAAGCGACGG AAGAGGCGGG ACGGTCGAAA TCAATGTTCC AATTGAGGTA 
GCGGCTGCCC CTGATGTGAA AATCGATATC TCACAAAGTC CCGTTAAGAC CATATTCAAT 
GCCTTAACCT TTGGATTGTT CTTTAATGAT TCTATTGATG TATCACTTTC ATCAGGAAAA 
ACTGAGATAG ATCATTTTGA ATATCAGATT GTTGGTGCTG AGAGTCCCTT TGATTCTAAC 
GGCACATGGA CAACGGGAAA TTCCTTCAGT GTTGAGCCGG ATTTCATGGG CAGGGTTTAT 
GCCAGAGCTG TTTTCACAGA CGGAGCAGTT ACAGAGACAT ATATCAAAGC TCTTGTGGTA 
GATAAGACAA AGCCTGAGAT TGGAGCAGTT TATGATAAAG ATAATGCATC TATAGCAGTA 
ACGGTCTCTG ATATAAGTGC AGGTATAGAT ACAATAACCT ATCAGGTTGG TTCAGGTGAA 
GTTAAGTCAG TGAATCTGAC ACCTACAGCA GAGAAAGATA TTACGTTTGA ATACAGCTTT 
ACCATCAGTA GTCTGCCGGA GGGCCAGTAT GATGTAGTAA TTAATGCAAT AGATAATTCG 
GATAATGCAG CAGATACAAA AACTTTAAAT ATTGTGAATA ATGGAGTTGC AAGTGCTGAG 
ATCAGTCCTG TAAGCGAAAG CTTTGATATA AATGTTCCAG CTGATGTAAG CACAACAATC 
ACATGGAATG ATGCAAGCTC TGTAACCGAT GTGGTCTATG GCGGAAATCC GGTGACATCG 
GACTCCTATG AAGTTAGTGG AGATACATTG ACTTTAAAAA GCAGCTATCT GGCTTCACTT 
GGACTTGTAA ACGGTGATAC TTCGGAGTTT ATAATCAACT TTGATAGAGG AAACCCGGTT 
ACGTTTGTTG TTAGCATTAT AGACAGCTCT GACCCAACGC CGGTAAATCG CAGCATCTCA 
GTACAAAATG ATGGAAATGG TACTGCAAGT GCAAATGTTA CTTCTGCGAC AGAGGGTACG 
GAAGTTACAC TGACCGCGAC TCCAAACGAA GGCTACCGCT TCAAGGAATG GCAGGTAATC 
TATCCAACAG GATTGGCTAT TACCGGTAAC ACCTTTACAA TGCCGAACGG GGCTGTGTCT 
GTAAAAGCAA TATTTGAGCA GAACCCGGTG GTAAATTATA CTCTGTCTGT AAACGGTAGC 
TATTCTAACG AATCGGGTGC AGGCAGTTAC GTGGAAGGTT CCACCGTTAC AATTAATGCA 
GGAAGCCGCA GCAATTATAC CTTCCGAGGC TGGAGCTCGG GGGATGGTGT AACTTTTGCC 
AACGCAAACA GTACTACCAC TACATTTACA ATGCCTGCAA AGAATGTGAC GGTAACCGCA 
TCATGGACTT ACAACGGAAG TTCCCCATAT AACGGAACCA TTCCTTCCCA ACCTGCTACG 
AAAGACTATA CAGCAGATAT AAAGGTGTCG GGTGCGTCAG GCAACAGTAC ACTCCCAATT 
ACTGTTGATG CAAAAACAGG TACTGCACGT CTGGATACAG CTTCAAGGAA CGAACTTGTA 
GCAAATGGTG GAATATCCGT CATTACAGTA CCATCAATCC CCGATGTTGA TACTTACTCT 
GTGGGAATTC CGGTTCCATA TCTGTCAACG GCTGATTGGC AAGGTTCTCT AAGAGTTAGC 
ACCAACAGAG GAAGCATTAC AGTACCGTCA AATATGTTGA CAGGTATTGC AGAGGCAGCT 
GGAACAAAAG CAGAAATCAC AATAGGAAAG GGTGACAAAG CCACATTGAC CGAGGCTGCA 
AAAACAGCCA TAGGTGACAG ACCGCTGATT CAGCTCACTA TGTACATAGA TGGAAAGCAA 
ATGGAATGGA ATAACCCTAA TGTACCTGTT ATGGTAACTA TCCCGTATAC TCCGTCGGCT 
GAAGAACTGG CAAATCCAGA GAGAATTATA ATCTGGTATA TCGATGACAA CGGCAAGGCG 
GTAGCAGTTC CTAACGGACA TTATGACCCG GCTTCAGGCA CTGTGGCCTT TGATACAACT 
CATTTCAGCT CCTATGCTAT AGGTTATAGT GATGTCAGCT TTAATGATGT GACGGAAAAT 
GCATGGTATA ACAAGGCCGT GAGCTTTATC GCTGCAAGAG ATATTACCGC AGGTACCGGC 
AATGGATATT TCAGTCCGAA TGCAAAGCTC ACCAGAGGTG AATTTATTGT AATGCTGATG 
AAAGCATATG AAATTGCTCC CGACGGAAAG CAGTCAAGTA ACTTTGAAGA TGCAGGCAAT 
AAATACTATA CAGGATATCT TGCTGCGGCA AAAAGGCTGG GAATATCCGA AGGTATAGGA 
AAGAATATGT TTGCACCTGA AAAACAGATT ACGCGTCAGG AAATGTTCAC TATGCTGTAC 
AATGCCTTGA AAACTATGGA CAAGCTGCCA CAAGGCGATA CAGGAAAATC ATTGTCAAGC 
TTTGACGACG AAGAAATGGT AGCTTCATGG GCAAGGGATG CTATGACATT GTTGGTTGAA 
ACAGGAATAG TTGGGGGAAA TGCCGGACAG CTTACTCCCG CTAGCACAAC AACCAGATCA 
GAAATGGCAC AAGTACTGTA TAACCTGATA TATAAAAATT AA 

 

Protein sequence

MRKKSLVMLS LAIVLSLLLT SISYADVTSS YQNPLMRGAD PTIARAADGF YYSCFAVDND 
IYLKKADTIL GVGTAKSRLA WDKPADFGYV WGPYIYRLDG KWYIYFTSAP ENSFGYGHPS 
SYVLENTSPD PFEGTWELKG VSANADEDGQ VTDKPGLLNT QGYGLACGVV TMGGKTYFTY 
TKYFYYPDPN DPTKEKFDEC PTIVEMENPW TLKGTEGTLA RPVYDWEKQG DSINEGAAVV 
ERNGKVYFAY SASSFMNDNY CVGVSTADAQ SDLLQESNWT KNPEPALAKS PENSSFGPGS 
PLFVKSEDGT EDWLIYHGGP VGGQTGSNRW VRAQRINWND DGSINLGIPS NPGTVLDRPS 
GEEKSETYEA EDASFAGVTR TILSDSSKAS GSGVMKYDNS SNGYVEFTVD ANMPGSYSLN 
FRYNNSTGSN ITMSLGVNQN SSRELSFEPN GSNSTNYDLL RVHNVQLNAG HNKIRLSSSE 
ANGLVLDAMI IKKSVLYEAE NAALSGGALV STEHSGYSGT GFVGGMYTEG TSAEFTVDAP 
YAGNYSVNLR YCNGFSNIDK TLSMYVNGVK VKQIDLFSFG DWSKWSERYD NIELRAGSNT 
ITYKYDSGDG GNVNLDYITV TEATTRHYEA ENAVLTGNAQ KSTDHTGYTG TGFVGGFWTE 
GSVEFSVNVE TAALYDVKLK YALGFPEDRT MSIYLNGSKV KQVTLPSTGG WDTWSEYLET 
LSLNKGNNTI SIKRDSDDSG DINIDSIHLD RRISWKYQAE DATLLGGAHP VDDHLWYEGT 
GFAGGFETLY ESIQFNVNVP NTATYTTTLR YSGAQENDIT MSLYVNGTKI KQVSLPPTAD 
WDSWGEATET VNLKAGKNVI EYKRDDGDTG RFNIDSMTID KYSVGDTDLK NRGIVSGTVY 
TIKAKHSGKA LDVSGYSSEP GALVDQWTYV GGNNQRWEII DLGTGYYKIK SAHSGLVLDI 
VEGSPDMDLC QTTSSPAETQ QWILEKVGGY YKIVNKSNGM VLDVSEESYD NGKKVHLYSY 
VGKANQLWKI DVASANELFI PVTGITDVPV TATAGTDLTL FANVLPYNAT NKSIEWRVKD 
AGETGATISG NTLSTVGAGT VLVTAVITDG MPDDNAYTQD YIIQINAVNH APTAKANIPV 
AAVAADDSVS FIASDIAEDE DGDTLTIAEI KTSPDSAMAS AILDNGTVTV SGVAPGSTDA 
TLVVSDGRGG TVEINVPIEV AAAPDVKIDI SQSPVKTIFN ALTFGLFFND SIDVSLSSGK 
TEIDHFEYQI VGAESPFDSN GTWTTGNSFS VEPDFMGRVY ARAVFTDGAV TETYIKALVV 
DKTKPEIGAV YDKDNASIAV TVSDISAGID TITYQVGSGE VKSVNLTPTA EKDITFEYSF 
TISSLPEGQY DVVINAIDNS DNAADTKTLN IVNNGVASAE ISPVSESFDI NVPADVSTTI 
TWNDASSVTD VVYGGNPVTS DSYEVSGDTL TLKSSYLASL GLVNGDTSEF IINFDRGNPV 
TFVVSIIDSS DPTPVNRSIS VQNDGNGTAS ANVTSATEGT EVTLTATPNE GYRFKEWQVI 
YPTGLAITGN TFTMPNGAVS VKAIFEQNPV VNYTLSVNGS YSNESGAGSY VEGSTVTINA 
GSRSNYTFRG WSSGDGVTFA NANSTTTTFT MPAKNVTVTA SWTYNGSSPY NGTIPSQPAT 
KDYTADIKVS GASGNSTLPI TVDAKTGTAR LDTASRNELV ANGGISVITV PSIPDVDTYS 
VGIPVPYLST ADWQGSLRVS TNRGSITVPS NMLTGIAEAA GTKAEITIGK GDKATLTEAA 
KTAIGDRPLI QLTMYIDGKQ MEWNNPNVPV MVTIPYTPSA EELANPERII IWYIDDNGKA 
VAVPNGHYDP ASGTVAFDTT HFSSYAIGYS DVSFNDVTEN AWYNKAVSFI AARDITAGTG 
NGYFSPNAKL TRGEFIVMLM KAYEIAPDGK QSSNFEDAGN KYYTGYLAAA KRLGISEGIG 
KNMFAPEKQI TRQEMFTMLY NALKTMDKLP QGDTGKSLSS FDDEEMVASW ARDAMTLLVE 
TGIVGGNAGQ LTPASTTTRS EMAQVLYNLI YKN