11 homologs were found in PanDaTox collection
for query gene PSPTO_1013 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1013  tonB domain protein  100 
 
 
261 aa  498  1e-140  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0875  TonB, C-terminal  82.38 
 
 
254 aa  321  9.000000000000001e-87  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.544286 
 
 
-
 
NC_009832  Spro_0601  TonB family protein  50.19 
 
 
248 aa  173  1.9999999999999998e-42  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0811  TonB-like protein  59.62 
 
 
248 aa  130  3e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1663  hypothetical protein  34.38 
 
 
2449 aa  61.2  0.00000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1944  TonB family protein  29.06 
 
 
242 aa  56.6  0.0000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2301  TonB family protein  29.06 
 
 
242 aa  56.6  0.0000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0610  pullulanase, type I  29.55 
 
 
1888 aa  53.1  0.000005  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013422  Hneap_2159  TonB family protein  29.86 
 
 
277 aa  48.9  0.00008  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2906  TonB-like  26.62 
 
 
235 aa  47  0.0003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.155829  normal  0.22869 
 
 
-
 
NC_007912  Sde_3402  hypothetical protein  26.32 
 
 
431 aa  43.5  0.004  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.904792 
 
 
-
 
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