Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1944 |
Symbol | |
ID | 6877929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1935807 |
End bp | 1936535 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642789812 |
Product | TonB family protein |
Protein accession | YP_002220370 |
Protein GI | 198284049 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCACCG CCCTCGCATC CCCGTTGTTC CGCCCCCCGG AAGAAGGCCC CCTGCTGCGG CGGGCCTTGC TGGCCGCCGT GGCAGTGGAA CTGCTGGTAA TCGGCAACAT GGCGTTTTTC TTCCGTCAGG AAAAGCCGCA ATCCCCGTCC ATTCCCCCCA TGCAACTGGC GCTGATCGCT CCGGAGCCGG CCAAGGTCAT TCCACCGTCA CCAAGACCAG CAGCCCAACC CAAGGCGACA CCCAAGCCCA TGCCAAAACC GGTAGCGAAG CCGCTTCCAC GGCCCGTCAC CCAGCCGGTG GAGGCGCCGC GGCCGGCCAC CACGGCACCG AGCCCATTGC CTGCTGCACC GTCTCTTCCA TCGCCTGTGA ACGCCCCGCC AGTCCAGAAC GCCAACCCGG TCAAAAGCGA CCCCGGGCCC AGGGAGGACC GGGCCGGAGA AGGACAATAT GCCGGCAGGG TGGCGGGCGA GATCGAAAAA CACAAGGTCT ATCCGGCTAG CGCCAAAGAA CTCGACATGA CCGGCGACGT CGTCCTTGCC TACACCATCA GCCGGCAAGG CAGCGTAATG GAGGCGTCCG TCCTCAAGTC TTCCGGCTTC AAGCTGCTCG ACGAAGCCGC CTTGAAGGCC CTGCGCGCCA GCCGCTTTGA CGCCATGACC GCCGGCCTAT GGCCCGGAGC CCCCAGCAAG ACCTTCACCA CCACCGTGCA TTTCGCATTA GACGACTGA
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Protein sequence | MTTALASPLF RPPEEGPLLR RALLAAVAVE LLVIGNMAFF FRQEKPQSPS IPPMQLALIA PEPAKVIPPS PRPAAQPKAT PKPMPKPVAK PLPRPVTQPV EAPRPATTAP SPLPAAPSLP SPVNAPPVQN ANPVKSDPGP REDRAGEGQY AGRVAGEIEK HKVYPASAKE LDMTGDVVLA YTISRQGSVM EASVLKSSGF KLLDEAALKA LRASRFDAMT AGLWPGAPSK TFTTTVHFAL DD
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