| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1663 |
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| Symbol | |
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| ID | 4439138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1627014 |
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| End bp | 1634363 |
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| Gene Length | 7350 bp |
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| Protein Length | 2449 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673485 |
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| Product | hypothetical protein |
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| Protein accession | YP_815393 |
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| Protein GI | 116630221 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA GAAAATATAT AAAAAATAGT GCTAACGCTA GACAACGCTT TAGTATCCGT
AAACTTACCA TCGGTACGGC TTCTGTTTTA TTGGGAACAG TTTTCTATTT AGGAGTAAAT
GAAACAACCG TTCAAGCTGC AAGCGCTGAT AGTGCAGAGA ACGAAGTGCA GACTGTAGCT
ACTTCCCCAA TTTTGAAAAA TAAGGCTACA ACAGTTAAAA GTTCAGAAAC TACTGATGCT
AAAACTCCAG TAGTTCAAAC GAAAACTGTC GAATCATCAA AGACAGATGT AGAAAATAAA
GCAGATAAAT CTGCTGTTCA AGCTACAGAA GTTAATGTAG ATAAAAAAGA TGATGAAAAG
GTAGCGACTA AAGATATAAA TTCTGCTGAA AAAAAGCAGC AAAATACTCA GACTTTAGAT
ACCTTAAAAG CAGTTCCAAC TAACACTGCT GAACTTAATG AGAGTAAGGT TCAAATTAAT
AGTGAAGTTT CAAAAAATTC TTCAAAGATA TTAAATAATT CTTTTGTTTC TCTTCAATCT
GATAGCAGTG ATAAAAATCT AAAAGTATCA GCTTCACTTA GTGGTACTGA ATATAATCCA
AGTCAAAATC AAACTATTCA AATGACTTTC CAGGTTTCTA ATAACAAAGC AGGGGATCAG
TTTAGGCTTC ACTTTGATTC AGGTGCATAT ATGGTTACTC CTACCGCTCT TCCTTCTGCT
TTTGGAAGCA TGAATAAGGT TCAAAATTCA GATGGTAGTT ATGATGTAAC ATATTCTTTA
AATAAAAGTG CAACTATTAA TCAAACGTTA TCAATAGGTT TTCTTAATGA GGCTCAAGCC
AAGGCAATGC CTTATAATGC GGGAACTGAA TTAAAAAATA TTCAAATCTT TTATAATGAA
AATTCACAAC CGATTAAAAC TTTAACTTTT AATCAGGTAG TTGTTCCTCA ACTTAATCCA
AGGTGGCGTA GAATAAGTCC AAGCTCAAGT GCAGTAAAGA AGCTGTTTCC TAACTATGAT
TATAAATGGC AATTGACTTT GGGACAAAAA ACAGGGATAA ATGGTGATAT TTCCTCTGGC
GGTACTAGTG GTCCTAGTCC GTTGATTAAT CATGAAACAA CGATTACAAT ACCTGTCCCA
GAAAGCTTTG TCCTAAATAC TGAAAAGACA ATAGCAGAAA ATTCTTCTTC AGCTACTGTT
ACACAGGCTG GAAAGGGAAA AGATATTATT GTTAAATTAG CTAACACAAC GCTTTCTTCA
TCTGTTCTTA ATATATGGGG ACATTTTGAT ATGGTTCAAC CAGCAGAAGA TACAACCGTA
TCTGGCTCAA AAGAAATAGA AGTTAGTGAG GATGTAGGGG CAAAACAACC ATTAACTGGA
AATGCAGGTA TTTTTAAAGA AGTAATTCAA GGATCAAATG AACATGTTCC AGTTGGTGAG
GCTCTTCGCG GTTATATTGG TGGAGCACAT AACGGATATG ATGGTCCGTA TCAGAAGGGC
CAAGTACCAT ATACTGCTTC TCATAAAGAA ATCGTACTGT ATAATTATTC CGTTGGAAAT
TTACAAGGTC GTCCAGTTAA TGATGTACAT CTAAAGATTA CGGTTCCAGA TGGAGTTACG
ATTACTAAAC TAGTAGGAAC AAATGTTAAA GATTTTAATT ATCAAATTAA TTATGTTGAT
AATTCAGTGA AATCAGGAAT GATTTCAAAT GGAGAAGCTG TAGCAATAGA GAATGGGACG
AATATCAGTA ATATAGTTTT GACAATTCCT CAATTAGGCA TTGACAGCTT AAACCCTCAA
GGATTGATTT GGGGGCAGGG AATAGACGTT GGATTTTCTC TATATGGTTT TGTCAATGAA
AATTATCGCA ATGGTCAGAA AGTAAATTTA GGCGATACGT TAACATCAGA TTTATATCCG
TATTTTGATA CGCCAAGTGA TGAGGGATAT TATACTGCTT CGCAGTCAGT TGTAGCTGAA
GAAAAAGATA GTATTACTAT TAACTTTACA GCTAGTAATT ATAATTATGC ACCTGGAAAC
TATGGCGGTA CCCTTACTAT AGGTGGATGG TACGCTAAAA AAGCGGTTGA TCCTATTTTC
TATTTGGTAA TGCCATCTAA TGCTCTAGCA GATTTATCAA CATCAAGTTT TAAATTTGGT
GAAACTAAAC CAAAAGTTTC TAGTTTTTCG GTAAATGGTT ATCAAGTTGT TAAAGTAGAT
TATACAGGAA TAAAGATAAC TGGTGGAGAT ATCACTATTT ATCTTAAAAA CTTACCAGAT
TCCAGTAGTG TAACTACGAA CAATGGACAT GTTTATTTAT ATGCTCAATC AAATATTGTA
AAAGACTATT CACTTAATGA ATATCCTACC GTGAAGGATT CGGATGTGAA CTATGTTGAA
GGAAAGACAT CGGCACTTGA TTTAGGTTCA TTTAATTGGA TTACGCAATT AGGTCAAGGC
TTGACTTCAG TAGAATTAGC GCAAGGAAAT GAAGATGGTA ATTTAGACCT AAATGGTAAG
TCTGATGATA AAAAATCTGA CACAATGACT TATACTGTTT CAGTTATAAA TGGTCAAAAA
TATGATATAA AGAATACACA TGTTTTAATA AATCTACCAA CAGAATCTAG TTCATCATTT
AGCTTCGTTT TAAACGAGAA TAATTCAGTT AAAATAATAG ATTTAAATAC ACAACAAGAA
ATCGCAGGTA AGATTTCTTA TTATAGCAAT TTATCAGATT TAAAGGATCA TATTGTAGGT
GGAGCTGTAA ATAGTGCTAA AAATGCCAAG AGCATTTTAG TTGATATAGA TAATGTTCCT
TCCAATCATT CGTATCGAAT TGTTCTAAAT GGTACCGATC CCACTTTGGG CTATGATGCA
GGAAAAACTG GTATTTTATC TTCAGTAGTT TGGTCCGATA ATACGCAATC TTTGGATTCC
CTATTTATTG AGTCAACAAG TAATAATGCA TCTAGAATTA CTATTTCTGG TAATTCAGTA
GTTAATATTG CCTTCAAATA TAAGGATTCA GCAGATACAG ATCAAGTTGT AGCAGCTGAT
TCAATAGAAC TAAAAAATAA CCAAGATCTA CTAAGCTACG GACCAGAAAA GGTATTGGCT
GCTTTAAAGA AACTTCAAGA TGCAAAGAAA ATTCCAGAAG ATTACGTAGT AAAAGATGCT
ACACAACCTC AAGAAATAAT TAATGCTGAT CATGGTGATT ACCCATCAGG AATTAAAAAC
GAGAAGGCAC AACTTAATCA ACAAGCAAAA GTGTACTTTG ATGGTGATAC TTTAGTATAT
GAATTAGTTA AAAATACACA AAGTGCTACA TTACGTTTCT ATGATGACAC TGATCATAAA
TTTATCGAGT TAGCGCCTGA TGTTAATATA ACTGGTAAGA GTGACGCTGA TATTAGCTTT
GAAATTCCTG CTAAGTATGA CTTCTCTAAG TATAAGTTTG TTATGGTAGC AAGGGGGAAC
GATCCAACAC AAAGTGATGA TAAACTTGCT GGAAATCAGT TATCTGAAAT AAATTATGGA
AAATTTGACA ATGATATTAA TGAAGATCAA ATTTTTATAG CTCACTTTAT TCACAAGACA
GCATCAGTTA AGGATACAAA GACAGTAACT GAAACAATTC ATTATGTTTA CGAAGATGGT
ACAAAAGCTC ATGACGATGT TCAAAAAGAA GTAACATTCA CTAAGACAGG AACTGAGGAC
TTAGTAACTG GTAAAGAGAT GAGCAGTTGG AGCAAGCCGC AGGAATTTGA AGAAGTAGTT
TCTTCAGAAA TTGCAGGCTA TACACCAGAT CAAGAAAAGA TTAATTCTGT CACAGTTTCA
CATGATTCAA AAGATGTTGT TAGAACAGTA ACTTATAAAG CAAATCCGCA AAAGATCACA
GTCAACTATA TCGATGATAC GACAGGCAAG ACTTTATCTA CTAAAGATCT TAATGGTAAA
TCCGATGAAA AATCAGACTA TGCGACTAAA GATTCAATTG CAGAGTATGA AAAGCAACAT
TATGATTTAG TTTCTGATGA AACAAATGGA AGTGAATTGG TCTTCGATCA TGATGACAAA
GTAGACCAAG TTTACAATGT ACACTTCACC CATCATATGA CTTCGATTAA TGATACGAAG
AAGATTAATG AAACTATTCA TTATGTTTAT GAAGATGGTA CAAAAGCTCA TGATGATATT
AATGGTCAGC CAGTAATTTT CACTCATGAT GGAGAACGTG ATGAAGTAAC TAATAAGGAA
CACTGGAATG ATTGGAAATC TGAAAAAGAT AGTTTTGATG AAGTTAACTC TCCAAAAATT
GCAGGTTACA CACCAGATTT TGCCACTATA GAAAAGATTA CGGTAAAACC AGAAGATTCA
GATGTCGTTA AAACAGTAAT TTACAAAGCA AATCCGCAAA AGATCACAGT AAACTATATC
GACGATACGA CAGGTAAGAC TTTATCTACT AAAGAGCTTA ATGGTAAATC CGATGAAAAA
TCAGACTATA CGACTAAAGA TTCAATTGCA GAGTATGAAA AGCAACATTA TGATTTAGTT
TCTGATGAAA CAAATGGAAG TGAATTGGTC TTCGATCATG ATGACAAAGT AGACCAAGTT
TACAATGTCC ACTTCACCCA CCATATGACT TCGATTAATG ATACGAAGAA AATTAATGAA
ACGATTCATT ACGTTTATGA AGATGGTACA AAAGCTCATG ATGATATTAA TGGTCAGCCA
GTAATTTTCA CTCATGATGG AGAACGTGAT GAAGTAACTA ATAAGGAACA CTGGAACGAT
TGGAAATCTG AAAAAGATAG TTTTGATGCA GTAAAATCAC CAGAAGTAGC TGGATATACA
CCTAATGCTG ATGCTATTCC TGAAATAAAG GTAAAACCAA CTGACTCTGA TATTGTTAGA
ACAGTAACGT ATAAGGCAGA TGCTCAAAAA GCTAAATTGA GATTTTATGA TGATACTGAT
CATAAATTTA TCGAATTAGC ACCAGACATT AATACAACGG GTAAGAGTGC TGAAAGTATT
GATTTTGATA TTCCTTACGA TTTCTCAAAT TACAATTTTA TTGAAGTTGA TAGTGCCAAG
GATCCAGCAG ATAAATCTAA TAAAATGAAT GGCGATACTT TAGATAAAGT AAACTATGGT
AACTTTGATA AGGATAAATA CACAGATCAA ATTTTTATAG CTCACTTTAC TCACAAGATC
GCACCAGTTA AGGATACAAA GACAGTAACT GAAACAGTTT ATTATGTTTA TGAAAATGGT
ACAAAAGCTC ATGACGATGT TCAAAAAGAA GCAACATTCA CTAAGACAGG AACTAAGGAT
TTAGTAACAG GTGAAGAAAA GAGCAATTGG AGTAAATCAA AAGAATTTGA AGAAGTAGTT
TCTCCAGAAA TTGCAGGCTA TACACCAGAT CAAGAAAAGA TCGATTCTGT CACAGTTTCA
CATGATTCAA AAGATATTGT TAGGACAGTG ACTTATAAGG CAAATCCACA AAAGATCACA
GTCAACTATG TCGATGATAC AACAGGTAAG ACTTTAGCTA CCAAGGAGCT TAATGGTAAA
TCTGATGAAA AGTCAGGCTA TACAACTAGT GATTCAATTG CTAATTATGA AAAGCAACAT
TATGATTTAG TTTCTGATGA AACAAATGGA AGTGAATTGA TCTTTGATCA CGATGATAAG
GTAGACCAAG TTTACAATGT ACACTTGATC CATCATCTGT CTTCGATTAG TGATACAAAG
ACGATTAATG AAACGATTCA TTACGTTTAT GAAGATGGCA AGACTGCAAG TCCTGATGTA
GTTGGTACTC CTGTAGTCTT CACTCGTGAT GGAGAACGTG ATGAAGTAAC TAATGAAGAT
ATGTGGAACG ATTGGAAGAC TAAAAAGGAT AGTTTTGATA AGGTTCAATC TCCAGAAATA
GCGGGATATA TACCTAATGT TGATGCTGTT CCTGAAATAA AGGTAAAACC AACTGACTCT
GATATTGATA GAACAGTAAC GTACAAAGCT GATGAACAAA AAGCTAAATT GAGATTCTAC
GATGATACTG ATCATAAATT TATTGAATTA GCGCCAGATA TTAATACTCT AGGTAAGAGC
AATGAAAATA TCAGTTTCAA TGTTCCATAT AATTTATCAA ACTATAGTTT TATTGAGGTT
GATAGCAGCA ATGATCCAGC GGATAAATCT GATAAGTTGA ATGGCGATAC TTTAGATAAA
GTAATCTATG GCAGATTTGA TAAAGATAAG AATGTAGATC AAGTCTTTAT TGCTCACTTT
ATTCACAAGA CCGAACCGAT TAAAGATACT AAGGTAGTAA CTGAAACAGT TCATTATGTA
TATGAAGATG GCACAAAAGC TCATGAAGAT GTTCAAAAGC AAGTAACATT CACTAAGACT
GGAAACAAGG ACTTAGTAAC TGGCAAAGAA AAGAGTAGTT GGAGCGGCCC GCAAGAATTT
AGCGAAGTGA TTTCTCCAGA AATTCAAGGT TACACACCAG ATCAAGGAAA GATTAATTCT
GAGGTTGTTT CCCAAGATTC AAATGACATT GAACGGACAG TAATTTATAA GGCTAAACCT
GTAGAACCGA CAACACCGGA CAAGCCAGCA CAACCGAGTG AGCCAACGAA GCCGGAAGAA
CCGACAACAC CAGATAAACC AGCACGACCA ACTGAACCAA CGAAGCCGGA AGAACCGACA
ACACCGGACA AGCCAGCACA ACCGAGTGAG CCAACGAAGC CGGAAGAACC GATAACACCG
GACAAGCCAG CACAACCGAG TGAGCCAACG AAGCCAGAAG AACCGACAAC ACCAGATAAA
CCAGCACGAC CAACTGAACC AACGAAGCCG GAAGAACCGA CAACACCGGA CAAGCCAGCG
CAACCGAGTG AACCGATTAA GCCGGAAGAA CCAACAACAC CGGACAAGCC AGCGCAACCG
AGTGAGCCAA CGGAGCCGAA AGAACCGACA ACACCGGACA AGCCAACACA ACCGAGTGAG
CCAACGAAGC CGGAAGAACA AACAATATCT AACAAGTCAA ATCAATCGAG TGAAACAGAA
TCATCTAAGA CTGCTATGCA AATTAATAAG TCAAACAAGT CCAAGAATGT TGAAGCTACA
AACATTTCTA CAAGCTTAAC TCGTACAACT TCTGCTGCTA AAACTTCAAG AAATGCTACA
ACAACGAAGC ATATTAATCG TGCTAGAACA ACACTTCCGC AAACTGGTAG TCGGAAGACG
GACGTATCAT TAGCAGGATT AGCATTAGCT TCTGCCGGAG CCTTGATTGG ATTAATTGGC
GGTAAAGAAA GGAAGAGAAG AAAAAGATAA
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| Protein sequence | MNNRKYIKNS ANARQRFSIR KLTIGTASVL LGTVFYLGVN ETTVQAASAD SAENEVQTVA
TSPILKNKAT TVKSSETTDA KTPVVQTKTV ESSKTDVENK ADKSAVQATE VNVDKKDDEK
VATKDINSAE KKQQNTQTLD TLKAVPTNTA ELNESKVQIN SEVSKNSSKI LNNSFVSLQS
DSSDKNLKVS ASLSGTEYNP SQNQTIQMTF QVSNNKAGDQ FRLHFDSGAY MVTPTALPSA
FGSMNKVQNS DGSYDVTYSL NKSATINQTL SIGFLNEAQA KAMPYNAGTE LKNIQIFYNE
NSQPIKTLTF NQVVVPQLNP RWRRISPSSS AVKKLFPNYD YKWQLTLGQK TGINGDISSG
GTSGPSPLIN HETTITIPVP ESFVLNTEKT IAENSSSATV TQAGKGKDII VKLANTTLSS
SVLNIWGHFD MVQPAEDTTV SGSKEIEVSE DVGAKQPLTG NAGIFKEVIQ GSNEHVPVGE
ALRGYIGGAH NGYDGPYQKG QVPYTASHKE IVLYNYSVGN LQGRPVNDVH LKITVPDGVT
ITKLVGTNVK DFNYQINYVD NSVKSGMISN GEAVAIENGT NISNIVLTIP QLGIDSLNPQ
GLIWGQGIDV GFSLYGFVNE NYRNGQKVNL GDTLTSDLYP YFDTPSDEGY YTASQSVVAE
EKDSITINFT ASNYNYAPGN YGGTLTIGGW YAKKAVDPIF YLVMPSNALA DLSTSSFKFG
ETKPKVSSFS VNGYQVVKVD YTGIKITGGD ITIYLKNLPD SSSVTTNNGH VYLYAQSNIV
KDYSLNEYPT VKDSDVNYVE GKTSALDLGS FNWITQLGQG LTSVELAQGN EDGNLDLNGK
SDDKKSDTMT YTVSVINGQK YDIKNTHVLI NLPTESSSSF SFVLNENNSV KIIDLNTQQE
IAGKISYYSN LSDLKDHIVG GAVNSAKNAK SILVDIDNVP SNHSYRIVLN GTDPTLGYDA
GKTGILSSVV WSDNTQSLDS LFIESTSNNA SRITISGNSV VNIAFKYKDS ADTDQVVAAD
SIELKNNQDL LSYGPEKVLA ALKKLQDAKK IPEDYVVKDA TQPQEIINAD HGDYPSGIKN
EKAQLNQQAK VYFDGDTLVY ELVKNTQSAT LRFYDDTDHK FIELAPDVNI TGKSDADISF
EIPAKYDFSK YKFVMVARGN DPTQSDDKLA GNQLSEINYG KFDNDINEDQ IFIAHFIHKT
ASVKDTKTVT ETIHYVYEDG TKAHDDVQKE VTFTKTGTED LVTGKEMSSW SKPQEFEEVV
SSEIAGYTPD QEKINSVTVS HDSKDVVRTV TYKANPQKIT VNYIDDTTGK TLSTKDLNGK
SDEKSDYATK DSIAEYEKQH YDLVSDETNG SELVFDHDDK VDQVYNVHFT HHMTSINDTK
KINETIHYVY EDGTKAHDDI NGQPVIFTHD GERDEVTNKE HWNDWKSEKD SFDEVNSPKI
AGYTPDFATI EKITVKPEDS DVVKTVIYKA NPQKITVNYI DDTTGKTLST KELNGKSDEK
SDYTTKDSIA EYEKQHYDLV SDETNGSELV FDHDDKVDQV YNVHFTHHMT SINDTKKINE
TIHYVYEDGT KAHDDINGQP VIFTHDGERD EVTNKEHWND WKSEKDSFDA VKSPEVAGYT
PNADAIPEIK VKPTDSDIVR TVTYKADAQK AKLRFYDDTD HKFIELAPDI NTTGKSAESI
DFDIPYDFSN YNFIEVDSAK DPADKSNKMN GDTLDKVNYG NFDKDKYTDQ IFIAHFTHKI
APVKDTKTVT ETVYYVYENG TKAHDDVQKE ATFTKTGTKD LVTGEEKSNW SKSKEFEEVV
SPEIAGYTPD QEKIDSVTVS HDSKDIVRTV TYKANPQKIT VNYVDDTTGK TLATKELNGK
SDEKSGYTTS DSIANYEKQH YDLVSDETNG SELIFDHDDK VDQVYNVHLI HHLSSISDTK
TINETIHYVY EDGKTASPDV VGTPVVFTRD GERDEVTNED MWNDWKTKKD SFDKVQSPEI
AGYIPNVDAV PEIKVKPTDS DIDRTVTYKA DEQKAKLRFY DDTDHKFIEL APDINTLGKS
NENISFNVPY NLSNYSFIEV DSSNDPADKS DKLNGDTLDK VIYGRFDKDK NVDQVFIAHF
IHKTEPIKDT KVVTETVHYV YEDGTKAHED VQKQVTFTKT GNKDLVTGKE KSSWSGPQEF
SEVISPEIQG YTPDQGKINS EVVSQDSNDI ERTVIYKAKP VEPTTPDKPA QPSEPTKPEE
PTTPDKPARP TEPTKPEEPT TPDKPAQPSE PTKPEEPITP DKPAQPSEPT KPEEPTTPDK
PARPTEPTKP EEPTTPDKPA QPSEPIKPEE PTTPDKPAQP SEPTEPKEPT TPDKPTQPSE
PTKPEEQTIS NKSNQSSETE SSKTAMQINK SNKSKNVEAT NISTSLTRTT SAAKTSRNAT
TTKHINRART TLPQTGSRKT DVSLAGLALA SAGALIGLIG GKERKRRKR
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