| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0811 |
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| Symbol | |
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| ID | 8131736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 947613 |
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| End bp | 948359 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864095 |
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| Product | TonB-like protein |
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| Protein accession | YP_003016401 |
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| Protein GI | 253687211 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCTGC TCTATCGCTC ACGCCACGCC ATCAGTTGGT TACCGTTACC GGTGTTTGCC
ACCTGCCTGT TTTTCGCCAG CCAACAGCCA CCGCTGAAAG TTCAGCAGCA ATACGACGAA
ACGGTCATGG CACTCACGCT GGCTGAACCG GAGCCCGCAC CTCTACCCGA ACCGCTCCCT
GAGCCGGAAC CAGAACCTGT GCCACAGCCG GAGCCCGACC CCGAGCCGAT TCCGGTGAAT
GACCCCGATC CGATCATAGA GGCGCCGCCG GTTACGCCCC CGAAACCAGA AGTAAAGCCG
AAGCCTAAAC CAGAGGTGAA GCCCAAAGCG GAAACCAAAC CTAAACCGAC ACCCGCTCCG
GCTAAACCGA CTGCGCCACG CTCGGAAGCC CCGGCCAAGC CTCCGACGCC GACTGCTCCC
TCAGCGCCAT CGGTGAATGT CGCTGCAATA GAAAACAGTT ATGCGCAAGC GCTGCGCGCG
CAGCTTGAAC AAACCAAACG CTATCCGACC GGACGTCAGG CGTCACTCGA ACGCCCAGAA
GGTCGCGTTG AAGTCTGGCT GGAGGTCGAT CGCACAGGAC GCGTCATCAA TTCAGGGATC
AACAGCAAAG CGCCGAGCAT GCTGCTGAAC CGTGCTGCGC AAGCCAGCTT ACAGAGCATC
AAACAGGTTC GGGCCTTCCC TGCCGACGCC TTTGCAGGAC AAAACACAAA ACGCTTTTTA
GCCACGTTCG ATTATCAGGC GCAGTAG
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| Protein sequence | MYLLYRSRHA ISWLPLPVFA TCLFFASQQP PLKVQQQYDE TVMALTLAEP EPAPLPEPLP
EPEPEPVPQP EPDPEPIPVN DPDPIIEAPP VTPPKPEVKP KPKPEVKPKA ETKPKPTPAP
AKPTAPRSEA PAKPPTPTAP SAPSVNVAAI ENSYAQALRA QLEQTKRYPT GRQASLERPE
GRVEVWLEVD RTGRVINSGI NSKAPSMLLN RAAQASLQSI KQVRAFPADA FAGQNTKRFL
ATFDYQAQ
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