| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1013 |
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| Symbol | |
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| ID | 1182647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1106421 |
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| End bp | 1107206 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637392394 |
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| Product | tonB domain protein |
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| Protein accession | NP_790851 |
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| Protein GI | 28868232 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGCCC TGTTTCGGAT GCGTCAGTGG CTGGGCGGCT TGCCTGCGCT GGTGGCGCTC
ATTGCAATTG TGATCGGCGT GCAAACCCGG CCTCTGAAAA TGGAGCCGGT CTACGATGAG
TCTGCCGTGG AATTGGCACT GGTCGAGCCC GAATCGCCTG CGCCACAGCC TTTGGCACAG
CCCGAGCCGC CTCCGGTACA GCCCGAAGAG CCGCCGCCTG CGCCGCCCGT CATCGACAGC
GAAGAGGCCG AGCCTGCGCC GCCGCCACCG CCTCCAAAGC CTGTTTCCAA GCCAGAACCC
AAGCCAGAAC CCAAGCCTGC GCCCAAACCA GAACCGCGCC CCAAACCGTT GCCCAAGCCG
GCAGTGGCCA AACCCGTCGA ACCGGTTCAG GCCGCCAGCA AGCCGATAGC CAGCGCCCCG
GTTTCACCGC CGTCACCGCC GTCACCGCCT GCGCCGCCCG CGCCGCCGAA AGTGGACACT
CAAGGTATCG AGGGCGGCTA CCTCAAAGGG CTACGCAACG ATCTGGACGG TTACAAACAG
TATCCCACCG GACGTCAGGC ATCACTGGAG CGCCCGAGTG GCGAAGTGGT GGTGTGGTTG
TTGGTCGATC GGCAGGGTCG CGTGCTGGAT TCCGGCATTC AGACTCAGGC CTCCAGCATG
CTGCTCAATC GGGCCGCGAC CAACAGCCTG CGACGCATCA AGCAAGTCAA ACCGTTTCCC
GAACAAGCCT TCGGCGGGCG CAACGAGCAG CGCTTTACCG CCACCTTCAA CTACAGCGTG
CAATAG
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| Protein sequence | MYALFRMRQW LGGLPALVAL IAIVIGVQTR PLKMEPVYDE SAVELALVEP ESPAPQPLAQ
PEPPPVQPEE PPPAPPVIDS EEAEPAPPPP PPKPVSKPEP KPEPKPAPKP EPRPKPLPKP
AVAKPVEPVQ AASKPIASAP VSPPSPPSPP APPAPPKVDT QGIEGGYLKG LRNDLDGYKQ
YPTGRQASLE RPSGEVVVWL LVDRQGRVLD SGIQTQASSM LLNRAATNSL RRIKQVKPFP
EQAFGGRNEQ RFTATFNYSV Q
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