| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0875 |
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| Symbol | |
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| ID | 3366367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 997015 |
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| End bp | 997779 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637651218 |
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| Product | TonB, C-terminal |
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| Protein accession | YP_233971 |
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| Protein GI | 66044130 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.544286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTTC TGTTTCGTGT ACGTCAGTGG CTCGGCGGCC TGCCTGCGCT GGTGGCGCTC
ATCGCAATCG TGATCGGTGT GCAGACCCGT CCGCTGAAAA TGGAGCCGGT CTACGACGAG
TCGGCCGTGG AGCTGGCGCT GATCGAGCCC GAGCCGCCTG CGCCCGAGCC CGTCGTGCAG
CTCGAGGCGC CTGCGGTACA GCCTGACGAG CCGCCACCTC CGCCACCTGT AGTCGAAAGC
GAAGAAGCCG AACCGGCGCC ACCTCCACCG CCGCCCAAGC CCGTTCCCAA GCCAAAACCC
AAGCCGGAGA TCAAGCCAGA ACCCCGGCCT AAGCCCTTGC CCAAACCGGC AGTGGCAAAA
CCCGTCGAGC CGGTTCAGGC ACCCATTAAG CCGATCGCCA GCGCCCCGGT TGCGCCGCCG
TCACCGCCTG CGCCACCCGC ACCACCGAAG GTCGACACCC AGGGTATGGA AGGTGGCTAC
CTCAAGGGGC TGCGCAGTGA ACTGGACGGT TACAAACAAT ACCCGACTGG CCGTCAGGCC
TCACTGGAGC GCCCGAGCGG CGAGGTTGTG GTGTGGTTAT TGGTCGACCG CCAGGGGCGA
GTGCTGGACT CCGGCATTCA GACCCAGGCC TCCAGCATGC TGCTCAACCG TGCAGCCGCC
AACAGTCTGC GACGCATCAA GCAGGTCAAG CCGTTTCCCG AGCAAGCCTT TGGTGGACGC
AGCGAACAGC GCTTCACCGC CACCTTCAAC TACAGCGTGC AATAG
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| Protein sequence | MYFLFRVRQW LGGLPALVAL IAIVIGVQTR PLKMEPVYDE SAVELALIEP EPPAPEPVVQ
LEAPAVQPDE PPPPPPVVES EEAEPAPPPP PPKPVPKPKP KPEIKPEPRP KPLPKPAVAK
PVEPVQAPIK PIASAPVAPP SPPAPPAPPK VDTQGMEGGY LKGLRSELDG YKQYPTGRQA
SLERPSGEVV VWLLVDRQGR VLDSGIQTQA SSMLLNRAAA NSLRRIKQVK PFPEQAFGGR
SEQRFTATFN YSVQ
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