11 homologs were found in PanDaTox collection
for query gene PP_3858 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_3858  tail fiber protein, putative  100 
 
 		 267 aa  545  1e-154  Pseudomonas putida KT2440  Bacteria  normal  0.642523  normal  1 
 
 
-
 
NC_004578  PSPTO_4006  tail fiber protein H, putative  44.62 
 
 		 808 aa  58.5  0.00000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_08050  putative tail fiber protein  53.97 
 
 		 691 aa  56.2  0.0000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000383442  hitchhiker  0.000557531 
 
 
-
 
NC_004578  PSPTO_3398  tail fiber protein H, putative  33.59 
 
 		 689 aa  52.4  0.000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.87622  n/a   
 
 
-
 
NC_009800  EcHS_A2082  hypothetical protein  38.46 
 
 		 261 aa  52.4  0.000008  Escherichia coli HS  Bacteria  hitchhiker  0.00446645  n/a   
 
 
-
 
NC_010465  YPK_2809  putative bacteriophage tail fiber protein  38.57 
 
 		 238 aa  45.4  0.0008  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_2731  tail collar domain-containing protein  38.57 
 
 		 259 aa  45.4  0.001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.594625  n/a   
 
 
-
 
NC_010159  YpAngola_A1476  tail collar domain-containing protein  38.57 
 
 		 259 aa  45.4  0.001  Yersinia pestis Angola  Bacteria  normal  1  normal  0.736982 
 
 
-
 
NC_011769  DvMF_0751  hypothetical protein  39.13 
 
 		 430 aa  43.1  0.004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_007951  Bxe_A3044  hypothetical protein  38.6 
 
 		 320 aa  42.4  0.007  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.0000867038  hitchhiker  0.0000222782 
 
 
-
 
NC_009801  EcE24377A_1451  hypothetical protein  33.33 
 
 		 263 aa  42.4  0.007  Escherichia coli E24377A  Bacteria  normal  0.0220667  n/a   
 
 
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