| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1476 |
|---|
| Symbol | |
|---|
| ID | 5799944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 1526461 |
|---|
| End bp | 1527240 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641339429 |
|---|
| Product | tail collar domain-containing protein |
|---|
| Protein accession | YP_001605990 |
|---|
| Protein GI | 162418887 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.736982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA TTGGAGATAT TCCTAATACA CGCGCCGACA GTAACGGCGA ATTTACCGAC
GGCAACGTCG CCGGTGGCGT TCCACCCACC CTATTACCGG CTGAGTGGTT TAATACTATT
CAGCGAGAGT TGGTCACGGT GGTTCAAGAT GGAGGATTAA CCTTAGATCC TAATGACGAT
ACTCAGGTTT TAGCCGCACT GAAAAAGCTA TTTTTGCAGT CTGGTAATAA TCTCTCTGAG
ATAAAAGACG CCGGTCCAAC GGCTATAACA CAGACTCTCG CAAACCTTGG TTTGGGGGAA
GGCTCAGCAA TTCTGGTTGG GGTCCCGCTT CCGTGGCCTA CCGCCACTCC ACCCGAAGGT
TGGTTAAAAT GTAATGGTGC TATCTTTGAC AAAGTAAAAT ATCCAAAATT AGCATTGGCT
TATCCGTCAG GTATTTTACC GGACTTGCGG GGTGAGTTTA TTCGTGGCTG GGATGATGGG
CTTGGGGTTG ATGCAGGTCG GGAAATACTA TCAATACAAG GTGATGCGAT AAGAAATATC
TCTGGTGGAA TTCAGGGACG GAATGAAGCA ACATCGGCTA GACTTTTCAG CTCTAACGCC
ACTGGAGTTT TTCGCACTGA CGGTCAATTT GGATCTTATG CTGCTAGCGC AGATGTGGCA
GTAGGCGTTA CGGATGATAG ACTCGCCGAA CTTTTTTTTG ACGCTTCCAG ATCTGTACCC
ACAGCCAATG AAAATAGACC ACGGAATATT GCTTTTAACT ATATTGTGCG AGCGGCATAA
|
|---|
| Protein sequence | MQKIGDIPNT RADSNGEFTD GNVAGGVPPT LLPAEWFNTI QRELVTVVQD GGLTLDPNDD
TQVLAALKKL FLQSGNNLSE IKDAGPTAIT QTLANLGLGE GSAILVGVPL PWPTATPPEG
WLKCNGAIFD KVKYPKLALA YPSGILPDLR GEFIRGWDDG LGVDAGREIL SIQGDAIRNI
SGGIQGRNEA TSARLFSSNA TGVFRTDGQF GSYAASADVA VGVTDDRLAE LFFDASRSVP
TANENRPRNI AFNYIVRAA
|
|---|
| |