Gene YPK_2809 details

Gene Information

• Locus tag: YPK_2809
• ID: 6089228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 3097303
• End bp: 3098019
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641597878
• Product: putative bacteriophage tail fiber protein
• Protein accession: YP_001721538
• Protein GI: 170025033

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAA TTGGAGATAT TCCTAATACA CGCGCCGACA GTAACGGCGA ATTTACCGAC 
GGCAACGTCG CCGGTGGCGT TCCACCCACC CTATTACCGG CTGAGTGGTT TAATACTATT 
CAGCGAGAGT TGGTCACGGT GGTTCAAGAT GGAGGATTAA CCTTAGATCC TAATGACGAT 
ACTCAGGTTT TAGCCGCACT GAAAAAGCTA TTTTTGCAGT CTGGTAATAA TCTCTCTGAG 
ATAAAAGACG CCGGTCCAAC GGCTATAACA CAGACTCTCG CAAACCTTGG TTTGGGGGAG 
GCGGCAAAAT TGGGTGTGGC AACTAATTCT CAGATGGCGG CAGGAACGAA CGTATCCTTA 
CTTCCTTCGG TTGCTGCTGT GATGAGCATC TTCAGTAAGC GTACTTTTAC CGGTAATGAT 
TATATCAGAA TTCCTGATGT GCCTGGAGGT TTAATTATTC AGTGGGGTCT CTTGCCTAAT 
TTACTTCAGA ATATTAATAC ATCGTCAGCA TGGAGTGCTT TATTACCAAT TCCGTTCCCA 
AACTCTATTA TTGGCGGGAC AGTTACGACT GGTGCCACAC AAACACCCTT ATCTAGCGGA 
GCGACTTTAT CAAACACCAT GGGAGAACTT GGAATGGTAA CGACTATTGC AGGATATGTC 
CAAAACACCC GAATTGACCA AGGTGTTAAT ATCTACTACA TCGCAATAGG ATACTGA 

 

Protein sequence

MQKIGDIPNT RADSNGEFTD GNVAGGVPPT LLPAEWFNTI QRELVTVVQD GGLTLDPNDD 
TQVLAALKKL FLQSGNNLSE IKDAGPTAIT QTLANLGLGE AAKLGVATNS QMAAGTNVSL 
LPSVAAVMSI FSKRTFTGND YIRIPDVPGG LIIQWGLLPN LLQNINTSSA WSALLPIPFP 
NSIIGGTVTT GATQTPLSSG ATLSNTMGEL GMVTTIAGYV QNTRIDQGVN IYYIAIGY