9 homologs were found in PanDaTox collection
for query gene Nham_1604 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_1604  hypothetical protein  100 
 
 
134 aa  258  2e-68  Nitrobacter hamburgensis X14  Bacteria  normal  0.993744  n/a   
 
 
-
 
NC_007964  Nham_3078  hypothetical protein  89.47 
 
 
116 aa  158  2e-38  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3315  Phage tail tape measure protein  61.95 
 
 
858 aa  106  1e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0157558  normal  0.305468 
 
 
-
 
NC_008751  Dvul_1076  tail tape meausure protein, putative  58.7 
 
 
974 aa  54.3  0.0000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3322  Phage tail tape measure protein TP901, core region  34.07 
 
 
743 aa  49.7  0.00001  Nitrobacter hamburgensis X14  Bacteria  normal  0.787637  n/a   
 
 
-
 
NC_011891  A2cp1_1312  hypothetical protein  66.67 
 
 
472 aa  49.7  0.00002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1993  hypothetical protein  40 
 
 
191 aa  45.8  0.0002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0769561  hitchhiker  0.00451154 
 
 
-
 
NC_007794  Saro_3128  hypothetical protein  65.62 
 
 
193 aa  43.9  0.0008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0929  hypothetical protein  63.64 
 
 
174 aa  43.9  0.0008  Maricaulis maris MCS10  Bacteria  normal  normal  0.333514 
 
 
-
 
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