Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1993 |
Symbol | |
ID | 4082158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2104129 |
End bp | 2104704 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638010369 |
Product | hypothetical protein |
Protein accession | YP_617037 |
Protein GI | 103487476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0769561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00451154 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGAGA TCGACGAGAT GGTCGTCGCG GTGCGCGCCG ACACGGGGGC GTTCCGGCGC GACATTGCCG CGCTGCGCGC GGAGCTGCGC GGGCCGCTGG TCGCCGGCGC CGAGGAGGCG GGAAATGCGA TCGAGCGGGC GCTGTCGCGC GCGATCACCA CCGGCAAGCT GGGGTTCGAG GATCTGAAGC GGCTGGCGCT GTCGGTGATG GCCGACATTG CGCGTGCAGC GATTTCGGGC GGGCTGGGGG CGGCGCTGGG CGGCGGCGGG GCGAGCGGGG GCGGCGGGCT TCTGTCGCTT GGTTCGTCGA TCGCGATGGC GCTGTTCGGG GCGCCGGGGC GCGCGACGGG CGGGCCGGTG AGCGCGGGGC GCGCCTATCG CGTCGGCGAG CGCGGACCCG AGCTGTTCGT GCCGACCGCG AGCGGGCGGA TCGAGGCGGC GGGCGGGGCG ACGCGGCATA TCGCGATCAC GGTGAATGTG CAGGGGCCGG CGGGCAATGA TCCGCAGCGG CTGGCGCAGA CGGGGCGGCA ACTGGCGCGC GCGGTGCGGC GCGCGGTGGC GGCGGGGGAG GACTGA
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Protein sequence | MDEIDEMVVA VRADTGAFRR DIAALRAELR GPLVAGAEEA GNAIERALSR AITTGKLGFE DLKRLALSVM ADIARAAISG GLGAALGGGG ASGGGGLLSL GSSIAMALFG APGRATGGPV SAGRAYRVGE RGPELFVPTA SGRIEAAGGA TRHIAITVNV QGPAGNDPQR LAQTGRQLAR AVRRAVAAGE D
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