| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3315 |
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| Symbol | |
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| ID | 3911116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3789946 |
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| End bp | 3792522 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885217 |
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| Product | Phage tail tape measure protein |
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| Protein accession | YP_486922 |
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| Protein GI | 86750426 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0157558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.305468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACCG GCTTCTCTGT ATTCGTGAAC ATCGGCGGCA AGCTCAACCC GAGCCTTGCC
GCCGCTGTCG GCCAGGCGAA GGCGCAAGTC GGCGGACTTA GCGCTTCGCT CGCCGGCATT
GGCGCGCGCT TGAACGCCCC GTTCATTGCC GCAAACAAGC ACCTGGACGC CACGTCGAAA
CGTATGGCAG CGGTGCAGCG GAAGGGCCGC GATATGTCGT TGGCCGTGAC GGCCCCGGCC
GCATGGTTTG GCGCGAACAT GGTCAAGGAC GTTGCTGATT TTGCGAAGGC CGGAAACTTT
TCGGAGGCGC TTGGCGACAT CCCCAAAGAG CAGCGCCTTG AGCTTGAGAA GATCGCTCAG
AGCTTCTCGG CAAAATACGA TGCCGGCGGT GCGACCGGCA TCATGAAGAC TGCGACCGAA
CTGATCAAAG CCGGCTTCAC CTATGCGCAG GCGCGCGGTT CACTTGAACA AGTGCTTGCC
GCGTCGGCGC TGTCTGGTGA CATGGCGGCA GCCGATCTCG GCGCGGCGAT CAGCAAGAGC
ATCGTACAGT TTCAATTGCC GTTCAAGACG CTGGAACAGG CGTCGGCATC TTCTAAGGTG
GTGAGCGACC GCATGGTGTA TGCGGCTGTC TCAACCACCG CTTCGATGCG CGATATGTCC
GAGTCATTCA AATTTGCCGC TGGCATTGCG AGTAGCACGG GTAGCTCGCT TGATCAGACC
ACCGGCCTGA TCATGAAATT CGCGCAGGCC GGCGTGCTTG GCAGCGAGGC CGGCGTGGCG
CTGCGCAGCG CGCTTGTCCG GCTGGTCAAG ATGCCGAAGG GCGGCATGGC CGCACTGTCG
CGGATCGGAA TGAACCTTGG CGACTACACG TCGGCACGGC CGATCACCTC GGGTGGCATC
GTCGGTGGCT TACAGGCCGG CGGCATTGAC GTATCCAAAT CCGTCGAAAA GCAGATCGCC
GCGATCATCA AGGCCGGCGG TGGACAGAGC GCGCAGGTTG CCGCGATCAC CAAAGCTGTG
CAGAGCGGCA TGGGCAGTTC GTCGGCTGTT GACGCGAATG AGATTGCCGA GTCGGTGAAC
GCCGCATATA CGGCGGCCGG ATCGAAGATC GACATTACCA GGTTCTTTGA GGATTTGCGC
GCCAAGCTGG AAAGCGGAGC GGCGACCACC GGCGACATTG CGCAGATCTT GGAGGCCCGG
CATATCAGCC GCTACATGGC GTTGCTGCGC GGCGACAAGC TTTCAGACGT GATCGAAAAG
ATCGGACGGG AAGCCGATGG ATACGCTGAG GCCCGCTACA AAATCGCAAA CCAAGGCTTG
CCGGCCGAAA TCCTGAAATT GAACTCGGCA GTTTTCGAGT TGAAGAACAC GCTGGTTTCG
GCGGTGACGC CCGAACTTGT GACCATCTTC GATCGCATCG GCGCATCGTT GAAGGGTATC
GCCGGGAGCA ATCCGGCCGT TCTGAAACTC GGCATCGGCT TTGTTGCGGC TGCCGCTGCG
GCGGGCCCGC TGATGTTCGC TCTTGGCGCA ATCGGCCGGC TCGGGGTGTT CGCGCTGAAA
GGCCTCAGCA CGGGGCTGGC ACTGTTGCTG GCACCGATCG GCATGGCGGC GCGTGGCATC
GTCGGGCTTA CCGCTGCACT CTCTGTGGGG CTTGTGGCGG CCGTGGCGCG GACCCGTGCA
GCACTCGCCG GCCTCTTGGC CCTGACGGCG GTCGGCGGCG CTGGCACGGG CCTCGCCGCC
ATCGGCACGG GCTTGCTCGC CTTCGGCCGC GCGGTCCTGA CGTTCCCGCT GGTGGCCCTG
CGTGGCGTCG GGCTCGCGAT GGGCGCGCTG CTGTTGAACC CGGTCGGGCT GGTCTTCACG
GGCCTTGTCA CCGCCTTGGC CGCGCTTGGG ACGTGGATCG CCAACAATTG GGAGGGCCTG
AAGAGCTTCT TTGCTGGTTT CGGCGACGGG TTCATGAAGG GACTTGGTCC GGCCGCCGGG
GTGATCAAGA GCATTGGCGA CGGCCTCGCG TCCGCCTTCG GGTGGCTGGG CAAGTTGCTT
GGCCCGTTGG ACGAGTCCGG CGCCAAATGG AAGTCGTGGG GAGAGACCAT GGGCGGCGCC
GTCGCTCAAG GTGTCAACGC GGTGATCGAC GGGATCAAGA GCCTGATTGG CTTCTTCGGC
ACGGTCATCG AGAAGGCTGT GGCGCTCGGC GGTGCCATCC GTAATCTGTG GTCAGCTCCG
AAGGCGTTGC CGAATGCGCC TCGCGCCGCG CCGCCCATTG CTGGCGCTCG CGCGCTTGGC
GGCCCCGTGA CCTATGGCAA GCCGTACCTG GTCGGTGAGC GCGGCCCCGA ACTGTTCGTG
CCCGGCGCGA CCGGCCGAAT CGAGACGAAC GGCGCTCTGC GGCAAATGAC CTCCAGCGGG
GCAGCGGCGG CCGCGGGCTC GACGACCACG ACCCGCACGA GCACGTATTC GTTTTCCAAC
CATTGGACCA TCAATGGCGC CGAAAATCCC CGCGCTATTG CCGATCAAAT TGACGGCCGG
TTCCGGAGGC TGCTTGCAGA TCTTGAAAGC GAGCAAAGGG GGCTGTTGAG CGACTGA
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| Protein sequence | MATGFSVFVN IGGKLNPSLA AAVGQAKAQV GGLSASLAGI GARLNAPFIA ANKHLDATSK
RMAAVQRKGR DMSLAVTAPA AWFGANMVKD VADFAKAGNF SEALGDIPKE QRLELEKIAQ
SFSAKYDAGG ATGIMKTATE LIKAGFTYAQ ARGSLEQVLA ASALSGDMAA ADLGAAISKS
IVQFQLPFKT LEQASASSKV VSDRMVYAAV STTASMRDMS ESFKFAAGIA SSTGSSLDQT
TGLIMKFAQA GVLGSEAGVA LRSALVRLVK MPKGGMAALS RIGMNLGDYT SARPITSGGI
VGGLQAGGID VSKSVEKQIA AIIKAGGGQS AQVAAITKAV QSGMGSSSAV DANEIAESVN
AAYTAAGSKI DITRFFEDLR AKLESGAATT GDIAQILEAR HISRYMALLR GDKLSDVIEK
IGREADGYAE ARYKIANQGL PAEILKLNSA VFELKNTLVS AVTPELVTIF DRIGASLKGI
AGSNPAVLKL GIGFVAAAAA AGPLMFALGA IGRLGVFALK GLSTGLALLL APIGMAARGI
VGLTAALSVG LVAAVARTRA ALAGLLALTA VGGAGTGLAA IGTGLLAFGR AVLTFPLVAL
RGVGLAMGAL LLNPVGLVFT GLVTALAALG TWIANNWEGL KSFFAGFGDG FMKGLGPAAG
VIKSIGDGLA SAFGWLGKLL GPLDESGAKW KSWGETMGGA VAQGVNAVID GIKSLIGFFG
TVIEKAVALG GAIRNLWSAP KALPNAPRAA PPIAGARALG GPVTYGKPYL VGERGPELFV
PGATGRIETN GALRQMTSSG AAAAAGSTTT TRTSTYSFSN HWTINGAENP RAIADQIDGR
FRRLLADLES EQRGLLSD
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