16 homologs were found in PanDaTox collection
for query gene Mrub_1408 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_1408  restriction endonuclease  100 
 
 
358 aa  739    Meiothermus ruber DSM 1279  Bacteria  normal  0.0487902  normal  0.0918777 
 
 
-
 
NC_006274  BCZK3443  endonuclease  36.44 
 
 
171 aa  71.6  0.00000000002  Bacillus cereus E33L  Bacteria  normal  0.861488  n/a   
 
 
-
 
NC_011772  BCG9842_B4342  type II restriction endonuclease family protein  34.19 
 
 
182 aa  67.8  0.0000000003  Bacillus cereus G9842  Bacteria  decreased coverage  0.000331313  hitchhiker  0.000000000249094 
 
 
-
 
NC_011658  BCAH187_A1093  type II restriction endonuclease family protein  34.19 
 
 
182 aa  67.4  0.0000000004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1742  restriction endonuclease  36.61 
 
 
189 aa  64.3  0.000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.704626  normal  0.49953 
 
 
-
 
NC_009972  Haur_4576  restriction endonuclease  31.62 
 
 
169 aa  59.7  0.00000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000197116  n/a   
 
 
-
 
NC_012918  GM21_2767  restriction endonuclease  36.52 
 
 
520 aa  54.3  0.000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007355  Mbar_A1622  hypothetical protein  31.62 
 
 
207 aa  52.8  0.000009  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.792875  normal 
 
 
-
 
NC_009091  P9301_11051  hypothetical protein  34.31 
 
 
289 aa  52  0.00002  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.117412  n/a   
 
 
-
 
NC_010511  M446_4420  restriction endonuclease  34.51 
 
 
249 aa  52  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  0.432554  normal 
 
 
-
 
NC_008817  P9515_11011  hypothetical protein  32.35 
 
 
145 aa  50.8  0.00004  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_11061  hypothetical protein  34.31 
 
 
289 aa  50.4  0.00005  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4155  restriction endonuclease  33.63 
 
 
247 aa  49.7  0.00007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1996  Mrr restriction system protein-like  31.79 
 
 
447 aa  45.4  0.001  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.00366255  normal  0.311144 
 
 
-
 
NC_013748  Htur_5043  restriction endonuclease  27.07 
 
 
349 aa  44.7  0.003  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_010625  Bphy_6871  restriction endonuclease  32.48 
 
 
200 aa  43.5  0.005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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