25 homologs were found in PanDaTox collection
for query gene Mchl_2371 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_2371  hypothetical protein  100 
 
 
296 aa  587  1e-167  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.193146  normal  0.0336172 
 
 
-
 
NC_010172  Mext_2095  hypothetical protein  96.62 
 
 
303 aa  566  1e-160  Methylobacterium extorquens PA1  Bacteria  normal  0.0128666  normal  0.0122297 
 
 
-
 
NC_010505  Mrad2831_5044  hypothetical protein  60.84 
 
 
297 aa  319  3e-86  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.205192  normal 
 
 
-
 
NC_010725  Mpop_2218  hypothetical protein  56.8 
 
 
294 aa  312  5.999999999999999e-84  Methylobacterium populi BJ001  Bacteria  normal  normal  0.062473 
 
 
-
 
NC_010172  Mext_2261  hypothetical protein  55.97 
 
 
295 aa  303  2.0000000000000002e-81  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.106617 
 
 
-
 
NC_011757  Mchl_2536  hypothetical protein  55.97 
 
 
295 aa  303  2.0000000000000002e-81  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.70197 
 
 
-
 
NC_010725  Mpop_1206  hypothetical protein  44.65 
 
 
278 aa  229  4e-59  Methylobacterium populi BJ001  Bacteria  normal  0.321887  normal  0.463504 
 
 
-
 
NC_011758  Mchl_5520  hypothetical protein  44.84 
 
 
284 aa  228  1e-58  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.444925  normal  0.155172 
 
 
-
 
NC_010172  Mext_1256  hypothetical protein  45.04 
 
 
305 aa  224  1e-57  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.168978 
 
 
-
 
NC_011757  Mchl_1417  hypothetical protein  45.04 
 
 
305 aa  224  1e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.344999 
 
 
-
 
NC_009720  Xaut_4179  hypothetical protein  45.88 
 
 
278 aa  213  3.9999999999999995e-54  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011758  Mchl_5693  hypothetical protein  39.33 
 
 
309 aa  165  1.0000000000000001e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.721893  normal 
 
 
-
 
NC_011666  Msil_1462  hypothetical protein  38.7 
 
 
290 aa  159  4e-38  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_2677  hypothetical protein  36.24 
 
 
317 aa  146  4.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.356132  n/a   
 
 
-
 
NC_011894  Mnod_2195  hypothetical protein  35.33 
 
 
334 aa  137  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2629  hypothetical protein  33.07 
 
 
270 aa  130  2.0000000000000002e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.712331  normal 
 
 
-
 
NC_010725  Mpop_4359  hypothetical protein  35.45 
 
 
313 aa  127  3e-28  Methylobacterium populi BJ001  Bacteria  normal  0.100275  normal 
 
 
-
 
NC_010172  Mext_3890  hypothetical protein  35.45 
 
 
330 aa  126  4.0000000000000003e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.526711  normal  0.295416 
 
 
-
 
NC_011757  Mchl_4258  hypothetical protein  35.45 
 
 
313 aa  126  4.0000000000000003e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.930732  normal  0.515923 
 
 
-
 
NC_010505  Mrad2831_1569  hypothetical protein  33.66 
 
 
326 aa  114  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0945587  normal  0.178884 
 
 
-
 
NC_011894  Mnod_2045  hypothetical protein  32.67 
 
 
331 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2810  hypothetical protein  32.88 
 
 
321 aa  108  2e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2498  hypothetical protein  33.33 
 
 
322 aa  105  9e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.250275  normal 
 
 
-
 
NC_007925  RPC_0632  meta-pathway phenol degradation-like protein  25 
 
 
316 aa  55.5  0.000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1047  MetA-pathway of phenol degradation-like protein  24.83 
 
 
307 aa  48.1  0.0002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.379936 
 
 
-
 
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