19 homologs were found in PanDaTox collection
for query gene MADE_00867 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00867  CRISPR-associated protein, Cse2 family  100 
 
 
189 aa  386  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3546  CRISPR-associated Cse2 family protein  47.28 
 
 
206 aa  171  5.999999999999999e-42  Marinomonas sp. MWYL1  Bacteria  normal  0.407914  normal  0.0760503 
 
 
-
 
NC_007963  Csal_0228  hypothetical protein  33.33 
 
 
230 aa  91.7  6e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3070  crispr-associated protein, Cse2 family  32.5 
 
 
182 aa  88.6  6e-17  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2478  CRISPR-associated protein, Cse2 family  37.75 
 
 
188 aa  87.4  1e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2985  CRISPR-associated Cse2 family protein  31.1 
 
 
192 aa  82  0.000000000000005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3253  crispr-associated protein, Cse2 family  31.87 
 
 
186 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.872797  normal  0.58166 
 
 
-
 
NC_011083  SeHA_C3136  Cse2 family CRISPR-associated protein  31.87 
 
 
186 aa  79.7  0.00000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.776659  normal 
 
 
-
 
NC_007498  Pcar_0958  hypothetical protein  32.69 
 
 
181 aa  71.6  0.000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2887  CRISPR-associated Cse2 family protein  31.82 
 
 
178 aa  60.5  0.00000002  Escherichia coli SMS-3-5  Bacteria  normal  0.680998  normal 
 
 
-
 
NC_009801  EcE24377A_3061  CRISPR-associated Cse2 family protein  30.52 
 
 
178 aa  59.3  0.00000003  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0399  CRISPR-associated protein, Cse2 family  32.19 
 
 
211 aa  58.5  0.00000005  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00469479  n/a   
 
 
-
 
NC_011094  SeSA_A3096  crispr-associated protein, Cse2 family  30.46 
 
 
200 aa  57.8  0.0000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.00223272  normal 
 
 
-
 
NC_011353  ECH74115_4012  CRISPR-associated protein, Cse2 family  28.57 
 
 
178 aa  54.7  0.0000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.113607  normal 
 
 
-
 
NC_007955  Mbur_0595  hypothetical protein  26.85 
 
 
143 aa  53.9  0.000001  Methanococcoides burtonii DSM 6242  Archaea  decreased coverage  0.000000000000035066  n/a   
 
 
-
 
NC_011832  Mpal_1606  CRISPR-associated protein, Cse2 family  27.68 
 
 
178 aa  52.4  0.000004  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.823422 
 
 
-
 
NC_011080  SNSL254_A3152  CRISPR-associated protein Cse2 family  30.49 
 
 
200 aa  51.6  0.000007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.817058 
 
 
-
 
NC_007796  Mhun_1379  hypothetical protein  25.32 
 
 
174 aa  45.1  0.0007  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00330561  normal  0.354679 
 
 
-
 
NC_012880  Dd703_3589  CRISPR-associated protein, Cse2 family  34.31 
 
 
219 aa  42.7  0.003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>