Gene Dole_2985 details

Gene Information

• Locus tag: Dole_2985
• ID: 5695844
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3585355
• End bp: 3585933
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641265601
• Product: CRISPR-associated Cse2 family protein
• Protein accession: YP_001530865
• Protein GI: 158522995
• TIGRFAM ID: [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAT ACTATTATTT AGACGCGGAA AGCTGTCAAT TGTTGCAGCG CTGGCATCAC 
TGGCTGGATA ACAACCGGGG AGACCGAGCC CGGCTGCGGC GGGCGGAACG GCCGGAAGAT 
GTTTTGCTGA CCGAAGCATT TTTTAATTTT CTAAAACAAA TGCCGAATAG CTGGCAGGAG 
CAGAAACCGA TTTTTTCCAG TGCGGCGGTG GCCGGGCTTC TGTCGCATGT AAAAGCGGAC 
CATCAGGTGG TGAGCAAGGG CTATCAGCCC AAAGATGAAA AGAAATCGAA AAAGATGGCC 
TCCTTTTCCG AACAATTGGC TACATCAATT AAAGGCGACA GGGGAGCTAT GAGCGAATTG 
CGTTTCCAGC AGTTGCAGAA AAGCCGGACA ACCGATGAAT TCTATCGCCG CATGGTCCGG 
GCGATTCGCC TGCTGGACGG CCGGGTAAAT ATCCTCTCCC TGGCCAATGA CATTATTCAA 
TGGCACAAAG AGCATGATCG GGAGTTTGAC CGCAAGCCGG CCAACCGCCT GGCTGTCCGC 
TGGGCTACCG ATTATTTTTC AGTGTTACCG AACAACTAA 

 

Protein sequence

MSEYYYLDAE SCQLLQRWHH WLDNNRGDRA RLRRAERPED VLLTEAFFNF LKQMPNSWQE 
QKPIFSSAAV AGLLSHVKAD HQVVSKGYQP KDEKKSKKMA SFSEQLATSI KGDRGAMSEL 
RFQQLQKSRT TDEFYRRMVR AIRLLDGRVN ILSLANDIIQ WHKEHDREFD RKPANRLAVR 
WATDYFSVLP NN