| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3061 |
|---|
| Symbol | cse2 |
|---|
| ID | 5589047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3060994 |
|---|
| End bp | 3061530 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640926705 |
|---|
| Product | CRISPR-associated Cse2 family protein |
|---|
| Protein accession | YP_001464081 |
|---|
| Protein GI | 157154905 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTG TAAAAGAGGA GCACAAAGCC ACGCTGCGCA AATGGCACGA GGAATTGCAG
GAGAAACGTG GCGAACGTGC CAGTCTGCGG CGTAGTACGA CGGTTAATGA TGTTTGTCTG
ACGGATGGAT TTCGCCTGTT TCTGAAGAAC AGACAAATAA AGTGGCAGGA TGAACCTGAG
TGGCGTATCA CCGCACTGGC GCTGATAGCC GCAGTTAGCG CCAATGTTAA AGCTATTGAT
GAACGGCAGC CTTTTGCCGC GCAGCTGGCG GCGGTAATGT CAAAGGGGCG TTTTACTCGT
CTGTCGGCAG TAAAAACACC GGATGAATTA CTGCGCCAGT TACGCCGCGC AGTCAGATTA
TTAAACGGTT CCGTCAATCT TGACTCTCTG GCAGAGGGGG TCTTCCGTTG GTGCCAGGAG
AGCGACGACC TGCTCAATCA TCACCGCCGC CAGCAGCGGC CAACCGAATT TATCCGTATC
CGCTGGGCGC TGGAATATTA CCAGGCTGGC GACGCCGATA ACGAACAAAA TCAATAA
|
|---|
| Protein sequence | MSIVKEEHKA TLRKWHEELQ EKRGERASLR RSTTVNDVCL TDGFRLFLKN RQIKWQDEPE
WRITALALIA AVSANVKAID ERQPFAAQLA AVMSKGRFTR LSAVKTPDEL LRQLRRAVRL
LNGSVNLDSL AEGVFRWCQE SDDLLNHHRR QQRPTEFIRI RWALEYYQAG DADNEQNQ
|
|---|
| |