Gene SeSA_A3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3096 
Symbolcse2 
ID6515261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2986527 
End bp2987129 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content51% 
IMG OID642748115 
Productcrispr-associated protein, Cse2 family 
Protein accessionYP_002115892 
Protein GI194734696 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00223272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACA GCAATACCGC AGCGTTATGC AGAATTCTCC ACCCCGATGC GCAGAAGGCG 
CTACTTGACT GGTTTGCTAC GTTGTCTGAG CGTTATGAGC GCAAGGATGG TAAACGAGTC 
AACGGTCGCG TCTGGCGGGC TGAGTTGAAA AGAATGGCGC CGCCATATGG CGTAATGATA 
TGTGAAGGGT ATGACGCTCT CCGCCAGACG CTGCTTAAAC ATATGCGACT GCAACCTCTT 
GATGAGATGG CTCTGGCGCT GTTTGTCAGC GTCGCTGTGC ATATTAAGAG TCATAAGGAG 
AATATTAGTT TCGCTGCGCA GTTAGGGGAA AAGCTTAACG GTTCTACGCC GTGCGTTTCT 
GTTCTGCGTT TTGAACGTTT GCAAAAAGCG TCCGACCCGG AAACATTTTG CCAGTTGTTG 
ATTCAGGCAG TGAAGATTCG CGGTACGGAG GGGGTGAATG TTCTTTCACT TGCCGATGGC 
ATTTTCCTGT GGATGGAAGA GTGGCAACGA CGCGAAAACC ATCAGCCGGA ATTCCGTACC 
CCCTTTGAAC GAAATCGCAT CCGTTGGGCG AACGAATATC TTTCCACGTC GCGTGGCAAA 
TAA
 
Protein sequence
MLNSNTAALC RILHPDAQKA LLDWFATLSE RYERKDGKRV NGRVWRAELK RMAPPYGVMI 
CEGYDALRQT LLKHMRLQPL DEMALALFVS VAVHIKSHKE NISFAAQLGE KLNGSTPCVS 
VLRFERLQKA SDPETFCQLL IQAVKIRGTE GVNVLSLADG IFLWMEEWQR RENHQPEFRT 
PFERNRIRWA NEYLSTSRGK