Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00867 |
Symbol | |
ID | 6777543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 914477 |
End bp | 915046 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754299 |
Product | CRISPR-associated protein, Cse2 family |
Protein accession | YP_002125175 |
Protein GI | 196155686 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG AGCTACTTCA ACGCGGGGTA TCAACGGCAC TTCGCTGGTG GAAATCTATG TATGCTAGCG CGAGTGAATT GAAAAAAGAG GGGATCCAGG CTGCTCCCAC TGCATGGAAA GCCGAATTAA AAAGAGCTGA ATCTATTGAT GCGGTGTTGC TCTCACAAGG ATTCAGAGCG CTTTGGTTAT CGTTAAGTAG TGATATAACT GAAGGCAGTG ACAAGCAAGT TAGCGAAAAC ATGCTTTGTT GGGCAGCGGT TGCCGGCGCT CTTGTTTCTG TGTCAGACAA CCATACTGAA AGCTTTGCTA AATTAGCCGG GAGAAAGGGC GATGGGGATA AACCTGTGGT GAGTGAATTG CGTTTCGCTC AATTGCAACA GGCGCAAGCG CCAGAAGAGT TTTTACGTCG AATTAGGCGA ATTTTAAAAC AACTAAAAGG CAAAGCATCA GTAACGCAGT TAGCCAAAGA TACCTGTTGT TGGTACCAGG AACTAACGTC AAATTATCCC CGAGAAGCTG ACAAACGCAT TGCGGTACGT TGGGCAATGG ATTACTACCA GGCAAATTAA
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Protein sequence | MNKELLQRGV STALRWWKSM YASASELKKE GIQAAPTAWK AELKRAESID AVLLSQGFRA LWLSLSSDIT EGSDKQVSEN MLCWAAVAGA LVSVSDNHTE SFAKLAGRKG DGDKPVVSEL RFAQLQQAQA PEEFLRRIRR ILKQLKGKAS VTQLAKDTCC WYQELTSNYP READKRIAVR WAMDYYQAN
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