Gene MADE_00867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00867 
Symbol 
ID6777543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp914477 
End bp915046 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content46% 
IMG OID642754299 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionYP_002125175 
Protein GI196155686 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG AGCTACTTCA ACGCGGGGTA TCAACGGCAC TTCGCTGGTG GAAATCTATG 
TATGCTAGCG CGAGTGAATT GAAAAAAGAG GGGATCCAGG CTGCTCCCAC TGCATGGAAA
GCCGAATTAA AAAGAGCTGA ATCTATTGAT GCGGTGTTGC TCTCACAAGG ATTCAGAGCG
CTTTGGTTAT CGTTAAGTAG TGATATAACT GAAGGCAGTG ACAAGCAAGT TAGCGAAAAC
ATGCTTTGTT GGGCAGCGGT TGCCGGCGCT CTTGTTTCTG TGTCAGACAA CCATACTGAA
AGCTTTGCTA AATTAGCCGG GAGAAAGGGC GATGGGGATA AACCTGTGGT GAGTGAATTG
CGTTTCGCTC AATTGCAACA GGCGCAAGCG CCAGAAGAGT TTTTACGTCG AATTAGGCGA
ATTTTAAAAC AACTAAAAGG CAAAGCATCA GTAACGCAGT TAGCCAAAGA TACCTGTTGT
TGGTACCAGG AACTAACGTC AAATTATCCC CGAGAAGCTG ACAAACGCAT TGCGGTACGT
TGGGCAATGG ATTACTACCA GGCAAATTAA
 
Protein sequence
MNKELLQRGV STALRWWKSM YASASELKKE GIQAAPTAWK AELKRAESID AVLLSQGFRA 
LWLSLSSDIT EGSDKQVSEN MLCWAAVAGA LVSVSDNHTE SFAKLAGRKG DGDKPVVSEL
RFAQLQQAQA PEEFLRRIRR ILKQLKGKAS VTQLAKDTCC WYQELTSNYP READKRIAVR
WAMDYYQAN