Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0399 |
Symbol | |
ID | 8528762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 432152 |
End bp | 432787 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | CRISPR-associated protein, Cse2 family |
Protein accession | YP_003257849 |
Protein GI | 261819743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00469479 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACA CGGCTGATTT TTTAGTTATC ACCAAGGATG ACGCGAAAAA GATTAATGAT TGGTTCGACG GTCTACAAAA CCGCCACGGC ACTCCCGGTA ATGGTCGTGC GCGACGGGCT GAGTTGCGCC GTGCCAAACA GCCCCCCTAC GGTGTGCTGA CCTGTCAGGG GTATCACGAT CTGGCGGGGA AATTAGCGGC GCGGTTAACA CAAGAGCATC ACATTGTGGC GCTGGCGATG TTTGTTTCTG TCGCGGCACA TGCAGAGAAA AATATGTTGA AGACCAGTTT CGCTGCCCAG CTAGGTGAAA AACAGGGCGG CGACCGTCCT TTTCTTTCCC CTTTGCGTTT TGAACGGCTA CAGCGTGCAC AAACGCCGGA AGAACTGCAT CGCCAGCTTT TTCGCGCGGT ACAAATACGC GGTGAGGCAG GCGTAAACCT TCCTTCGCTG GCGGACGGTA TTTTCCTATG GGCAGAAGAG TGGCAGGCAC GGCAGGAAAA CTGCGCACCT AACCTTCATC CCTTGCGGCG CAATGCTGTG CGCTGGGCAT GCGAATATGC GCGAGCGTCA CAAAACATCA CGCCCGATGA GCCAGATACC ACAGAAACGT CAACGACAGC TTCAGACAAG GAATAA
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Protein sequence | MANTADFLVI TKDDAKKIND WFDGLQNRHG TPGNGRARRA ELRRAKQPPY GVLTCQGYHD LAGKLAARLT QEHHIVALAM FVSVAAHAEK NMLKTSFAAQ LGEKQGGDRP FLSPLRFERL QRAQTPEELH RQLFRAVQIR GEAGVNLPSL ADGIFLWAEE WQARQENCAP NLHPLRRNAV RWACEYARAS QNITPDEPDT TETSTTASDK E
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