Gene SeD_A3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3253 
Symbolcse2 
ID6874070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3125019 
End bp3125579 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content48% 
IMG OID642786268 
Productcrispr-associated protein, Cse2 family 
Protein accessionYP_002216909 
Protein GI198244986 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.872797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.58166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG TGACGAAAGA TGATAAAGCC ACTTTGCGTC AGTGGCATGA TGAACTACAA 
GAAAAACGTG GATTACGTGC CAGCTTACGA CGTAGTAAAA CGGTGAATGA TGCCTGTTTG 
GCTGAGGGGC TTCATTCATT GTTAATGCAA ACACATTCTT TATGGAAAAA CAAAGCACCC 
TGGAATGTTA CTGCATTGGC AATCACAGCG GCACTGGCTG CACATATCAA ATTTATTGAT 
GAGCAAAAGA GTTTTGCTGC GCAGCTTGGA CAGAAGAAAG GTGGCGACAC TCCGGTGATG 
TCAAAATTAC GCTTCTCCCA CCTATTAGCG GTAAAAACGC CGGATGAACT GCTGCGCCAG 
TTACGGCGTG CGGTGAAGCT GTTAGATGGT TCGGTCAACC TGTTTTCTCT TGCAGACGAT 
ATTTTCTGCT GGTGCCAGGA GCAGAATGAC TTGCTGAACC ACCATCGCCG CCAGCAGCGG 
CCAACCGAAT TTCTTCGTAT CCGCTGGGCG CTGGAATACT ACCAGGCCGG CGATGGCGAT 
ACCGATAACG AACAAGATTA A
 
Protein sequence
MSVVTKDDKA TLRQWHDELQ EKRGLRASLR RSKTVNDACL AEGLHSLLMQ THSLWKNKAP 
WNVTALAITA ALAAHIKFID EQKSFAAQLG QKKGGDTPVM SKLRFSHLLA VKTPDELLRQ 
LRRAVKLLDG SVNLFSLADD IFCWCQEQND LLNHHRRQQR PTEFLRIRWA LEYYQAGDGD 
TDNEQD