9 homologs were found in PanDaTox collection
for query gene Lcho_3840 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_3840  hypothetical protein  100 
 
 		 200 aa  385  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008825  Mpe_A3392  hypothetical protein  50.53 
 
 		 445 aa  77.4  0.0000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0341472  normal  0.0243154 
 
 
-
 
NC_012791  Vapar_1817  hypothetical protein  45.16 
 
 		 172 aa  46.6  0.0002  Variovorax paradoxus S110  Bacteria  normal  0.347413  n/a   
 
 
-
 
NC_007973  Rmet_1576  hypothetical protein  50 
 
 		 227 aa  45.8  0.0004  Cupriavidus metallidurans CH34  Bacteria  normal  0.0556168  normal  1 
 
 
-
 
NC_010682  Rpic_1337  putative proline-rich protein  30.21 
 
 		 171 aa  45.1  0.0008  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.254173 
 
 
-
 
NC_003295  RSc1455  hypothetical protein  38.71 
 
 		 184 aa  44.7  0.001  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.936799 
 
 
-
 
NC_007908  Rfer_2605  hypothetical protein  38.71 
 
 		 164 aa  44.7  0.001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_2053  hypothetical protein  36.07 
 
 		 151 aa  42  0.006  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.327529  normal  0.235069 
 
 
-
 
NC_012856  Rpic12D_1402  hypothetical protein  39.68 
 
 		 178 aa  41.6  0.008  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.0239807 
 
 
-
 
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