Gene Rmet_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1576 
Symbol 
ID4038379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1696198 
End bp1696881 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID637976960 
Producthypothetical protein 
Protein accessionYP_583728 
Protein GI94310518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0556168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGATC CGATCTTTCG CAAGACGGAG GCAGGACAGG AAGAAATTCG CACGCGCGAA 
CGAAAGCTGG ATCAGAAACT GCGCGCGCTA TTGCTGATCG TGAATGGGGA GCGCGCCAGA
TCGGAGCTGG TGGCGCAAGT CGGCGCCCTG GGCATGGCCG GGGAAGCATT GGACACGCTG
CTGGCACTCG GACTGATCGA GCCAATACCG GCTCCCGCGG GCGCGAAGCC TGCCTTGTCG
ACAGTGCCGG CCACGGTTCG CCCAACTACC GGCCCGGCGC GACCCGCTCC GCAGCGAGCC
CCGGCCGAGA CCAATCTCTT CGCGGCCTAT TCATCGTTCA ACACGTCCGA TGGCAAGGGC
ATCGACGACG TCCTGGCGGA CACCACGATC GCCCCGGGCG CCCTGCCCGC CGCGAAGCCG
TCGACGCAGC CAGCCACGCC GGCACCCGAT AGCTACCAGC GGCTTTACCA CTTCTTTACG
GATGTGATCG GCAATCACCT CGGCCTGCGC GGCTATATGC TGCAAGTCAA AGTGGAAAAG
GCGGCGACGC TGGTGGAACT GGCCGCCCTG CGTGACATGC TGGGGGCTGC GCTTCAGAAG
GCGAAGGGAG AGATCACGGC GCGCGCGATC ATCGATCAGC TGGATCAGCT GCTGGCGGAG
ATGGGAATGG CGCCGGTGCG ATAG
 
Protein sequence
MVDPIFRKTE AGQEEIRTRE RKLDQKLRAL LLIVNGERAR SELVAQVGAL GMAGEALDTL 
LALGLIEPIP APAGAKPALS TVPATVRPTT GPARPAPQRA PAETNLFAAY SSFNTSDGKG
IDDVLADTTI APGALPAAKP STQPATPAPD SYQRLYHFFT DVIGNHLGLR GYMLQVKVEK
AATLVELAAL RDMLGAALQK AKGEITARAI IDQLDQLLAE MGMAPVR