Gene Lcho_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3840 
Symbol 
ID6161955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4304083 
End bp4304685 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content71% 
IMG OID641666613 
Producthypothetical protein 
Protein accessionYP_001792859 
Protein GI171060510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGATTC CGTGCAAGAC GGCTGCAGGG CATGCCGAAC TGGTCGCCAG CGAGCGCAGG 
TTGTCGCAGC GCCACCGGAC GCTGCTGCTG CTGGTCGATG GCCGGCGCAG TGTCGACGAG 
GTCCTGCAGC TCGGCCTGCA GGCCGGCGTT CCTCGTGCCT ATCTGGACGA GCTGCTGGCC 
CTGGGGCTGA TCGTGCTGGC GGCGCCGATG ACGGCGGCGG TCCAGCTCGA TCAGGATCCC 
TTTGCCGCAA CCGCCGCGGC CTCCGCGTTC GCGTCGACGC CCGAGGTCGC ATCGGTCCAC 
GAGCATGACG ACGACGCGAT GCTCGACACC GTCGGCCTCG GTCCGGCCAT CTCCAACACC 
CAGCTGGCTC AGCTCGACGA CACCGACCTC GCGTTCGCCC AGGCGCGCAG CGTCCTGCTG 
CAGGCGCTGC TGATGCGCTC GCCGGTGAGC GGGGCGGTCA CAATGCTGCG TGTGCGGCGC 
GCCCGCAACC GTGTCCAGTT GCGAGCACTG CTACCCGAGG CGCATGCCCG GTTGGCTCGG 
CCGCTGCACC TGGCGCAGGC GCGCCAGGTG ATCTCGCGCG TCGAGGCGCT GCTCGCATCC 
TGA
 
Protein sequence
MGIPCKTAAG HAELVASERR LSQRHRTLLL LVDGRRSVDE VLQLGLQAGV PRAYLDELLA 
LGLIVLAAPM TAAVQLDQDP FAATAAASAF ASTPEVASVH EHDDDAMLDT VGLGPAISNT 
QLAQLDDTDL AFAQARSVLL QALLMRSPVS GAVTMLRVRR ARNRVQLRAL LPEAHARLAR 
PLHLAQARQV ISRVEALLAS